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04302015_12_scaffold_241

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_241_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276..365)
DNA (90bp) protein (30aa)
IS4 family transposase
Transposase {ECO:0000313|EMBL:AJP74183.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
04302015_12_scaffold_241_2
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(825..1706)
DNA (882bp) protein (294aa)
signal protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B597BA
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_12_scaffold_241_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1931..2785)
DNA (855bp) protein (285aa)
IS511, transposase OrfB n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDJ6_ERYLH
IS511, transposase OrfB
IS511, transposase OrfB {ECO:0000313|EMBL:ABC62245.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
04302015_12_scaffold_241_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2836..3102)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NDJ7_ERYLH
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
04302015_12_scaffold_241_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3151..3360)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035D752A
methyl-accepting chemotaxis protein
Sphingomonas taxi strain 30a NODE_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26343.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
04302015_12_scaffold_241_6
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3391..3735)
DNA (345bp) protein (115aa)
transposase IS4 n=1 Tax=Sphingobium chinhatense RepID=UPI000369350A
Transposase IS4 {ECO:0000313|EMBL:EPR10657.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense
transposase, IS4
04302015_12_scaffold_241_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3783..4151)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=K9CLK3_SPHYA
putative transposase for insertion sequence element
Uncharacterized protein {ECO:0000313|EMBL:EKU72748.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
04302015_12_scaffold_241_8
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5040..5480)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QSK8_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EGF89728.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticca
hypothetical protein
04302015_12_scaffold_241_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6295..6744
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488527
putative lipoprotein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
04302015_12_scaffold_241_10
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7296..9131
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GEG7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL28320.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
04302015_12_scaffold_241_11
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9139..10494
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg9 RepID=UPI00037B2FD0
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADI15824.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="
04302015_12_scaffold_241_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10491..11405
DNA (915bp) protein (305aa)
Putative glycosyltransferase C2F3.01 {ECO:0000313|EMBL:CDM56414.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDM56414.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AKZ7_MARMM
hypothetical protein
04302015_12_scaffold_241_13
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11422..12537
DNA (1116bp) protein (372aa)
Acyltransferase 3 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDV4_9SPHN
Acyltransferase 3 {ECO:0000313|EMBL:EGD57209.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium ni
acyltransferase 3
04302015_12_scaffold_241_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..14441
DNA (1908bp) protein (636aa)
Acyltransferase 3 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK76_9RHIZ rbh
Acyltransferase 3 {ECO:0000313|EMBL:CCV04620.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidu
acyltransferase 3 rbh
04302015_12_scaffold_241_15
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14438..16372
DNA (1935bp) protein (645aa)
Acyltransferase 3 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK76_9RHIZ
Acyltransferase 3 {ECO:0000313|EMBL:CCV04620.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidu
acyltransferase 3
04302015_12_scaffold_241_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16365..17381)
DNA (1017bp) protein (339aa)
Putative acetylase {ECO:0000313|EMBL:AHN24576.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;
04302015_12_scaffold_241_17
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17466..18353)
DNA (888bp) protein (296aa)
sialic acid synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
Sialic acid synthase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GZB9_9SPHN rbh
Sialic acid synthase {ECO:0000313|EMBL:EJL28323.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
04302015_12_scaffold_241_18
unknown

Not on your lists

18838..19326
DNA (489bp) protein (163aa)

This feature has no annotations

04302015_12_scaffold_241_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19569..19784)
DNA (216bp) protein (72aa)
Phage transcriptional regulator, AlpA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6D1_NOVAD
phage transcriptional regulator AlpA; K07733 prophage regulatory protein
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABD26592.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
04302015_12_scaffold_241_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19901..20347)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6X8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS42941.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_241_21
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20681..21082
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=I5B9Q4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66306.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indi
hypothetical protein
04302015_12_scaffold_241_22
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21110..21397
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9Q5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66307.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indi
conjugal transfer pilus assembly protein TraL; K12068 conjugal transfer pilus assembly protein TraL
04302015_12_scaffold_241_23
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21411..21992
DNA (582bp) protein (194aa)
Conjugal transfer pilus assembly protein TraE n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6Y1_9SPHN
Conjugal transfer pilus assembly protein TraE {ECO:0000313|EMBL:EZP79939.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
conjugal transfer pilus assembly protein TraE; K12067 conjugal transfer pilus assembly protein TraE
04302015_12_scaffold_241_24
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21989..22744
DNA (756bp) protein (252aa)
Conjugal transfer pilus assembly protein TraK n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E6Y2_9SPHN
conjugal transfer pilus assembly protein TraK; K12066 conjugal transfer pilus assembly protein TraK
Conjugal transfer pilus assembly protein TraK {ECO:0000313|EMBL:EHJ63028.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
04302015_12_scaffold_241_25
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22741..24141
DNA (1401bp) protein (467aa)
conjugal transfer protein TraB n=1 Tax=Sphingobium chinhatense RepID=UPI000366707F
TraB pilus assembly; K12065 conjugal transfer pilus assembly protein TraB
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_12_scaffold_241_26
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24138..25034
DNA (897bp) protein (299aa)
thiol:disulfide interchange protein DsbC (EC:5.3.4.1); K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
Thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:CCA92410.1}; EC=5.3.4.1 {ECO:0000313|EMBL:CCA92410.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Thiol:disulfide interchange protein DsbC n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILV8_9SPHN
04302015_12_scaffold_241_27
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25040..25846
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9R0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66312.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indi
hypothetical protein; K12064 conjugal transfer pilus assembly protein TraV
04302015_12_scaffold_241_28
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25846..28416
DNA (2571bp) protein (857aa)
ATPase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6C2_NOVAD rbh
IncF plasmid conjugative transfer pilus assembly protein traC {ECO:0000313|EMBL:GAO55779.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
ATPase; K12063 conjugal transfer ATP-binding protein TraC rbh
04302015_12_scaffold_241_29
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28416..28853
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9R2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP79945.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
04302015_12_scaffold_241_30
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28850..29251
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6ILV4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO86850.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
Displaying items 1-30 of 53 in total

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