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04302015_12_scaffold_295

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_295_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..277
DNA (276bp) protein (92aa)
Lipolytic protein G-D-S-L family n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQP4_DESVM
Putative esterase {ECO:0000313|EMBL:KFC68129.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
G-D-S-L family lipolytic protein
04302015_12_scaffold_295_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

366..1421
DNA (1056bp) protein (352aa)
NADP-dependent oxidoreductase n=1 Tax=Xanthobacteraceae RepID=UPI00037250E9 rbh
Putative oxidoreductase, NADP(H)-dependent aldo-keto reductase {ECO:0000313|EMBL:KFC68130.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bose
aldo/keto reductase rbh
04302015_12_scaffold_295_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1512..2090
DNA (579bp) protein (193aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1502851 species="B
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003641ECE
04302015_12_scaffold_295_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2093..2383
DNA (291bp) protein (97aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SZB0_9BRAD
04302015_12_scaffold_295_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2393..3163)
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000313|EMBL:KFC68135.1}; EC=5.4.99.- {ECO:0000313|EMBL:KFC68135.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] rbh
Pseudouridine synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDT3_METPB rbh
04302015_12_scaffold_295_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3236..4402
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F11F8C rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
04302015_12_scaffold_295_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4446..5075
DNA (630bp) protein (210aa)
Probable intracellular septation protein A n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZ71_9RHIZ
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
intracellular septation protein A; K06190 intracellular septation protein
04302015_12_scaffold_295_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5078..5863)
DNA (786bp) protein (262aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED3F6A rbh
Phosphoribosyl-AMP cyclohydrolase {ECO:0000313|EMBL:KFC62909.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;
short-chain dehydrogenase/reductase SDR
04302015_12_scaffold_295_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6058..6432
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EC78F5
Uncharacterized protein {ECO:0000313|EMBL:KFC62910.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_295_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6440..7414)
DNA (975bp) protein (325aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IL69_METNO rbh
NADPH2:quinone reductase {ECO:0000313|EMBL:KFC62911.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_295_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8090..8257
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5D2_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC62912.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_295_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8343..9563
DNA (1221bp) protein (407aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003629DC2 rbh
04302015_12_scaffold_295_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9568..10047
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_295_14
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10197..11870)
DNA (1674bp) protein (558aa)
Gamma-glutamyltranspeptidase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AI17_AZOBR rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:KFG70068.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilat
ggt; gamma-glutamyltranspeptidase rbh
04302015_12_scaffold_295_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12016..12624
DNA (609bp) protein (203aa)
LemA family lipoprotein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003783E45
LemA family protein {ECO:0000313|EMBL:KFC62916.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
LemA family protein; K03744 LemA protein
04302015_12_scaffold_295_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12734..13525
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U943_METS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC62917.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K06872 uncharacterized protein rbh
04302015_12_scaffold_295_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13525..14130
DNA (606bp) protein (202aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZJ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62918.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K08988 putative membrane protein
04302015_12_scaffold_295_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14138..14896)
DNA (759bp) protein (253aa)
Uncharacterized secreted protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZJ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC62919.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_295_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..15896)
DNA (933bp) protein (311aa)
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037C74CC rbh
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:KFC62920.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC8
04302015_12_scaffold_295_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16073..17095)
DNA (1023bp) protein (341aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZI9_9RHIZ rbh
Alcohol dehydrogenase, zinc-binding {ECO:0000313|EMBL:KFC62921.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
alcohol dehydrogenase rbh
04302015_12_scaffold_295_21
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17392..17634)
DNA (243bp) protein (81aa)
Prevent host death protein, Phd antitoxin n=1 Tax=Rhodovulum sp. PH10 RepID=J6LAC7_9RHOB
Prevent host death protein, Phd antitoxin {ECO:0000313|EMBL:EJW10338.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="
spsE; transcription regulator; possibly involved in symbiotic plasmid stability
04302015_12_scaffold_295_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17695..18441)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZI8_9RHIZ rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KFC62922.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
short-chain dehydrogenase/reductase SDR rbh
04302015_12_scaffold_295_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18438..19751)
DNA (1314bp) protein (438aa)
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-ACP synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003058B86 rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:KFC62923.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_295_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19762..20889)
DNA (1128bp) protein (376aa)
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
Beta-ketoacyl synthase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDR2_METS4 rbh
Beta-ketoacyl synthase {ECO:0000313|EMBL:KFC62924.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_295_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20886..21359)
DNA (474bp) protein (158aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ {ECO:0000313|EMBL:KFC62925.1}; EC=4.2.1.- {ECO:0000313|EMBL:KFC62925.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobact
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZI5_9RHIZ
04302015_12_scaffold_295_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21541..21822)
DNA (282bp) protein (94aa)
acyl carrier protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000319A512
Acyl carrier protein {ECO:0000313|EMBL:KFC62926.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
phosphopantetheine-binding protein
04302015_12_scaffold_295_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22073..24022
DNA (1950bp) protein (650aa)
Methyl-accepting chemotaxis protein signaling domain n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9L1_9CAUL
Putative methyl-accepting chemotaxis protein MCP {ECO:0000313|EMBL:KFC70966.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="B
mcp; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
04302015_12_scaffold_295_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24135..26834)
DNA (2700bp) protein (900aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1502851 species="Bacteria; Proteobacteria; Alp
acnA; aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase 1 n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HM58_9RHIZ rbh
04302015_12_scaffold_295_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27071..27688
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
heme exporter protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41]
Heme exporter protein CcmA n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9W621_METEP
04302015_12_scaffold_295_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27685..28353
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UCJ4_METS4 rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
heme exporter protein CcmB; K02194 heme exporter protein B rbh
Displaying items 1-30 of 38 in total

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