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04302015_12_scaffold_324

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_324_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..714)
DNA (714bp) protein (238aa)
AzlC family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A9N1_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC74317.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AzlC family protein
04302015_12_scaffold_324_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(869..1147)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC74316.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_324_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1152..3701)
DNA (2550bp) protein (850aa)
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:KFC74315.1}; EC=3.4.21.92 {ECO:0000313|EMBL:KFC74315.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6BF8E rbh
ATP-dependent Clp protease ATP-binding protein ClpA; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA rbh
04302015_12_scaffold_324_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3750..4091)
DNA (342bp) protein (114aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB00_METNO
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
04302015_12_scaffold_324_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4370..5242
DNA (873bp) protein (291aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] rbh
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Xanthobacteraceae RepID=UPI00035FD9F5 rbh
04302015_12_scaffold_324_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5235..6449
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDB0_METNO rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC69046.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
major facilitator superfamily protein
04302015_12_scaffold_324_7
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..8104
DNA (1500bp) protein (500aa)
Flp pilus assembly protein TadG n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QJH1_9CAUL rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:EGF93154.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcac
von willebrand factor type a rbh
04302015_12_scaffold_324_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8136..8591)
DNA (456bp) protein (152aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LEC6_9RHIZ
04302015_12_scaffold_324_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..10125
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] rbh
enolase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F04C14 rbh
04302015_12_scaffold_324_10
unknown

Not on your lists

comp(10130..10804)
DNA (675bp) protein (225aa)

This feature has no annotations

04302015_12_scaffold_324_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11004..11936
DNA (933bp) protein (311aa)
permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031D3A2D
Putative permease {ECO:0000313|EMBL:KFC69050.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DMT(drug/metabolite transporter) superfamily permease
04302015_12_scaffold_324_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11916..12701)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RW39_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC69051.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved membrane hypothetical protein
04302015_12_scaffold_324_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12698..13864)
DNA (1167bp) protein (389aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
queuine tRNA-ribosyltransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D836E1 rbh
04302015_12_scaffold_324_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13922..14692)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000316BF31
Bradyrhizobium elkanii strain UASWS1015 Contig182, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46504.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
04302015_12_scaffold_324_15
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14763..15116)
DNA (354bp) protein (118aa)
A glutathione-dependent thiol reductase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AL85_9CAUL
A glutathione-dependent thiol reductase {ECO:0000313|EMBL:GAD58454.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source=
arsenate reductase-like protein
04302015_12_scaffold_324_16
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15204..15785
DNA (582bp) protein (194aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BGW4_SANKS
04302015_12_scaffold_324_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15792..16496)
DNA (705bp) protein (235aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
glutathione S-transferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037EFBCB rbh
Putative glutathione S-transferase enzyme with thioredoxin-like domain protein {ECO:0000313|EMBL:KFC70468.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
04302015_12_scaffold_324_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16615..17355)
DNA (741bp) protein (247aa)
Transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I384_AZOC5 rbh
gntR; transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAF87991.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium cauli
04302015_12_scaffold_324_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17662..18711
DNA (1050bp) protein (350aa)
Twin-arginine translocation pathway signal n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I381_AZOC5
twin-arginine translocation pathway signal; K02055 putative spermidine/putrescine transport system substrate-binding protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:BAF87990.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="A
04302015_12_scaffold_324_20
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18714..19784
DNA (1071bp) protein (357aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I378_AZOC5
spermidine/putrescine ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAF87989.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobi
04302015_12_scaffold_324_21
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19781..20617
DNA (837bp) protein (279aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I376_AZOC5
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein
ABC transporter permease protein {ECO:0000313|EMBL:BAF87988.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobiu
04302015_12_scaffold_324_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20614..21414
DNA (801bp) protein (267aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I373_AZOC5
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein
ABC transporter permease protein {ECO:0000313|EMBL:BAF87987.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobiu
04302015_12_scaffold_324_23
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21414..22238
DNA (825bp) protein (275aa)
Putative polysaccharide deacetylase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I370_AZOC5
Cda1 protein {ECO:0000313|EMBL:BAQ50098.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
polysaccharide deacetylase
04302015_12_scaffold_324_24
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22417..23325
DNA (909bp) protein (303aa)
Putative polysaccharide deacetylase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHU7_ROSLO rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:EWY40876.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella
polysaccharide deacetylase rbh
04302015_12_scaffold_324_25
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23325..23981
DNA (657bp) protein (219aa)
hyuE; hydantoin racemase; K01797 [EC:5.1.99.-]
Hydantoin racemase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q166V1_ROSDO
Uncharacterized protein {ECO:0000313|EMBL:EWY40875.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
04302015_12_scaffold_324_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24159..25709)
DNA (1551bp) protein (517aa)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHU9_ROSLO rbh
Amidohydrolase {ECO:0000313|EMBL:EWY40874.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresist
5-methylthioadenosine/S-adenosylhomocysteine deaminase rbh
04302015_12_scaffold_324_27
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25868..26719)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV5_ROSLO rbh
Peptidase {ECO:0000313|EMBL:KJC54108.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein rbh
04302015_12_scaffold_324_28
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26834..27748)
DNA (915bp) protein (305aa)
Polysaccharide deacetylase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV4_ROSLO rbh
Chitin deacetylase {ECO:0000313|EMBL:KJC54109.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTS
polysaccharide deacetylase rbh
04302015_12_scaffold_324_29
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27903..28721)
DNA (819bp) protein (273aa)
Putative ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV3_ROSLO rbh
ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein rbh
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ABG31997.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source
04302015_12_scaffold_324_30
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28886..29749)
DNA (864bp) protein (288aa)
Putative ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZHV2_ROSLO rbh
ABC transporter permease rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:AEI93712.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="
Displaying items 1-30 of 48 in total

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