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04302015_12_scaffold_424

Search features with annotation key words

Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_424_1
unknown

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

04302015_12_scaffold_424_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..1880
DNA (1623bp) protein (541aa)
Peptide chain release factor 3 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0ULI6_METS4 rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphapr
peptide chain release factor 3; K02837 peptide chain release factor 3
04302015_12_scaffold_424_3
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2003..2722
DNA (720bp) protein (240aa)
membrane protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000372B29B
OmpW family protein; K07275 outer membrane protein
OmpW family protein {ECO:0000313|EMBL:ACA15142.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
04302015_12_scaffold_424_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2805..3284)
DNA (480bp) protein (160aa)
ArsR family transcriptional regulator n=1 Tax=Roseomonas sp. B5 RepID=UPI00031D1DA9
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KFC75514.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
transcriptional regulator, AsnC/Lrp family
04302015_12_scaffold_424_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3467..3988
DNA (522bp) protein (174aa)
Cysteine dioxygenase type I n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LXU7_METRJ
Cysteine dioxygenase type I {ECO:0000313|EMBL:KFC75513.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cysteine dioxygenase type I
04302015_12_scaffold_424_6
bacterium YEK0313, Bacteria

Not on your lists

4162..4746
DNA (585bp) protein (195aa)
pyocin R, lytic enzyme n=1 Tax=Kaistia granuli RepID=UPI00037291AA
Chitinase class I {ECO:0000313|EMBL:CEJ15922.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptidoglycan binding domain-containing protein; K03791 putative chitinase
04302015_12_scaffold_424_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4856..6010)
DNA (1155bp) protein (385aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48] rbh
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z042_9RHIZ rbh
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:KFC73152.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.
04302015_12_scaffold_424_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6095..6634
DNA (540bp) protein (180aa)
Tryptophan-rich sensory protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I6N9_AZOC5
tryptophan-rich sensory protein; K07185 tryptophan-rich sensory protein
Tryptophan-rich sensory protein {ECO:0000313|EMBL:BAF88430.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
04302015_12_scaffold_424_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6642..7016)
DNA (375bp) protein (125aa)
MFS transporter n=1 Tax=Methylobacterium sp. 88A RepID=UPI00037D66A8
Response regulator receiver {ECO:0000313|EMBL:KFC73149.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative two-component response regulator
04302015_12_scaffold_424_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7020..7580)
DNA (561bp) protein (187aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KFC73148.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KFC73148.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brad
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030E1387
04302015_12_scaffold_424_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7719..8555)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003663008
Putative Zinc finger/thioredoxin {ECO:0000313|EMBL:KFC73147.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_424_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8724..9347
DNA (624bp) protein (208aa)
cell division protein FtsE n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F3BD06
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:KFC73146.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein
04302015_12_scaffold_424_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9340..10305
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316ABF0 rbh
Cell division protein {ECO:0000313|EMBL:KFC73145.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09811 cell division transport system permease protein rbh
04302015_12_scaffold_424_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..11191
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y194_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC73144.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_424_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11242..12027
DNA (786bp) protein (262aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z036_9RHIZ rbh
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:KFC73143.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC
04302015_12_scaffold_424_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12101..12550
DNA (450bp) protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73142.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_424_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..13190)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D54F43
ChaC family protein {ECO:0000313|EMBL:KFC73141.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ChaC family protein; K07232 cation transport protein ChaC
04302015_12_scaffold_424_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13332..14381
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F9E2F5
Uncharacterized protein {ECO:0000313|EMBL:KFC73140.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_424_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14449..15345)
DNA (897bp) protein (299aa)
RNA polymerase sigma factor RpoH n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPM7_METNO rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacter
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor rbh
04302015_12_scaffold_424_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15560..16603)
DNA (1044bp) protein (348aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUE3_9RHIZ rbh
04302015_12_scaffold_424_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16662..16790)
DNA (129bp) protein (43aa)
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_424_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16787..18202)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA925A rbh
HemY-like protein {ECO:0000313|EMBL:KFC73137.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HemY domain-containing protein; K02498 HemY protein rbh
04302015_12_scaffold_424_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18219..20231)
DNA (2013bp) protein (671aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LLD0_9RHIZ
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:KFC73136.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.
04302015_12_scaffold_424_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20436..21509
DNA (1074bp) protein (358aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMT4_9RHIZ rbh
04302015_12_scaffold_424_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21506..22519
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
glycerol-3-phosphate dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI000381546A
04302015_12_scaffold_424_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22519..22854
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC73132.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_424_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22930..23337
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A5Y2_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFC73131.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_424_28
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23499..24626)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C3811
Uncharacterized protein {ECO:0000313|EMBL:KJB97568.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
04302015_12_scaffold_424_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24866..26818
DNA (1953bp) protein (651aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
acetyl-CoA synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031345E1
04302015_12_scaffold_424_30
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27413..28570
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4Y8_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF87786.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
Displaying items 1-30 of 38 in total

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