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04302015_12_scaffold_585

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_585_1
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..218
DNA (216bp) protein (72aa)
ABC transporter substrate-binding protein n=1 Tax=Actinobacillus capsulatus RepID=UPI00036CDF05
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJV10226.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="El
ABC transporter periplasmic protein
04302015_12_scaffold_585_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215..1207
DNA (993bp) protein (331aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1Z9H8_METPB
ABC transporter inner membrane protein; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACB81942.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
04302015_12_scaffold_585_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1204..2040
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X7M1_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELY56618.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolim
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein
04302015_12_scaffold_585_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2040..3599
DNA (1560bp) protein (520aa)
ABC transporter, ATP-binding component {ECO:0000313|EMBL:CBS89794.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBS89794.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE7FD5 rbh
ABC transporter ATP-binding protein rbh
04302015_12_scaffold_585_5
unknown

Not on your lists

comp(3517..3738)
DNA (222bp) protein (74aa)

This feature has no annotations

04302015_12_scaffold_585_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3764..5002)
DNA (1239bp) protein (413aa)
Major facilitator superfamily transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2K599_9PROT
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFC75679.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
putative Major facilitator family transporter
04302015_12_scaffold_585_7
unknown

Not on your lists

5114..5353
DNA (240bp) protein (80aa)

This feature has no annotations

04302015_12_scaffold_585_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6290)
DNA (759bp) protein (253aa)
Quinone oxidoreductase putative PIG3 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFS4_XANP2
quinone oxidoreductase putative PIG3
Quinone oxidoreductase putative PIG3 {ECO:0000313|EMBL:ABS66867.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthoba
04302015_12_scaffold_585_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..8000)
DNA (1404bp) protein (468aa)
TRAP-type C4-dicarboxylate transport system, large permease component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ12_9BURK rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:EHR72707.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
dctQ; large permease rbh
04302015_12_scaffold_585_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7997..8572)
DNA (576bp) protein (192aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000305DDD3
tripartite ATP-independent periplasmic transporter DctQ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
04302015_12_scaffold_585_11
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8592..9590)
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, subunit DctP n=1 Tax=Variovorax paradoxus B4 RepID=T1X4X2_VARPD
TRAP dicarboxylate transporter, subunit DctP
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
04302015_12_scaffold_585_12
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9817..10614
DNA (798bp) protein (266aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QWB9_9RHOB
Putative aldolase {ECO:0000313|EMBL:BAQ70837.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (
putative aldolase
04302015_12_scaffold_585_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10640..10879)
DNA (240bp) protein (80aa)
hypothetical protein n=2 Tax=Bradyrhizobium RepID=UPI000381BAE1
Uncharacterized protein {ECO:0000313|EMBL:AHY54087.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
04302015_12_scaffold_585_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11064..11783
DNA (720bp) protein (240aa)
Probable septum site-determining protein MinC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6Q7_9RHIZ rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="
minC; septum formation inhibitor; K03610 septum site-determining protein MinC rbh
04302015_12_scaffold_585_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11816..12631
DNA (816bp) protein (272aa)
Septum site-determining protein MinD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPE4_9RHIZ rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
minD; septum site-determining protein MinD rbh
04302015_12_scaffold_585_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12628..12891
DNA (264bp) protein (88aa)
Cell division topological specificity factor MinE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRX8_9RHIZ
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizob
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
04302015_12_scaffold_585_17
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12992..13342
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YFL3_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS48960.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing
arsR; ArsR family transcriptional regulator
04302015_12_scaffold_585_18
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13342..13755
DNA (414bp) protein (138aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; B
Arsenate reductase (Arsenical pump modifier) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUG7_9BRAD
arsenate reductase
04302015_12_scaffold_585_19
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13797..15131
DNA (1335bp) protein (445aa)
arylsulfatase n=1 Tax=Aureimonas ureilytica RepID=UPI0003673108 rbh
arsenical membrane pump; K03893 arsenical pump membrane protein rbh
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993, ECO:0000313|EMBL:CEM57848.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanth
04302015_12_scaffold_585_20
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15183..16235
DNA (1053bp) protein (351aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Pseudomonas putida RepID=UPI00035C576D rbh
Monooxygenase {ECO:0000313|EMBL:AIL61697.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
monooxygenase
04302015_12_scaffold_585_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16258..17499)
DNA (1242bp) protein (414aa)
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L6V1_9RHIZ rbh
Tryptophan-rich sensory protein {ECO:0000313|EMBL:KFC75726.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily (MFS) transporter
04302015_12_scaffold_585_22
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17499..18902)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000360E512 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD96542.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
pyridine nucleotide-disulfide oxidoreductase
04302015_12_scaffold_585_23
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18937..19254)
DNA (318bp) protein (106aa)
Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX3_9BRAD
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62879.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
transcriptional regulator
04302015_12_scaffold_585_24
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19339..20259)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CHC7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR52112.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulos
thioesterase/thiol ester dehydrase-isomerase; K07046 rbh
04302015_12_scaffold_585_25
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20256..20756)
DNA (501bp) protein (167aa)
2-hydroxy-3-oxopropionate reductase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSJ1_9RHIZ
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EIM26933.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae;
04302015_12_scaffold_585_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20828..22249)
DNA (1422bp) protein (474aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAQ3_STAND rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADH90920.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" so
04302015_12_scaffold_585_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22474..22773)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI000302D4EE
Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:KJB95027.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermane
hypothetical protein
04302015_12_scaffold_585_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..25175)
DNA (2163bp) protein (721aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
catalase-peroxidase 1; K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase-peroxidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K343_9PROT
Displaying 28 items

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