ggKbase home page

04302015_12_scaffold_707

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_707_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124..813
DNA (690bp) protein (230aa)
Outer membrane lipoprotein omp19 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LU92_METRJ
Protease inhibitor Inh {ECO:0000313|EMBL:KFC63687.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
outer membrane lipoprotein omp19
04302015_12_scaffold_707_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(818..1432)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000311B007
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KFC63686.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
N-acetyltransferase GCN5
04302015_12_scaffold_707_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1607..2215)
DNA (609bp) protein (203aa)
Glutathione S-transferase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RSG0_9RALS
Putative glutathione S-transferase like protein {ECO:0000313|EMBL:KFC74062.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bo
hypothetical protein
04302015_12_scaffold_707_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2295..2453)
DNA (159bp) protein (53aa)
Transcriptional regulatory protein {ECO:0000313|EMBL:KFC74063.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.
04302015_12_scaffold_707_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2633..2785
DNA (153bp) protein (51aa)
acyl carrier protein phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
Acyl carrier protein phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUC6_9RHIZ
Acyl carrier protein phosphodiesterase {ECO:0000313|EMBL:EHK55656.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
04302015_12_scaffold_707_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2917..3249)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZGD1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC71580.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_707_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3336..4589)
DNA (1254bp) protein (418aa)
FAD-linked oxidase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A779 rbh
FAD linked oxidase-like protein {ECO:0000313|EMBL:KFC73166.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
oxidoreductase
04302015_12_scaffold_707_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..5536)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LT13_9RHIZ
Putative prenyltransferase integral membrane protein {ECO:0000313|EMBL:KFC73167.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sourc
UbiA prenyltransferase
04302015_12_scaffold_707_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6729)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J987_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:KFC63658.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_707_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..7466)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI0003465F54
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:KFC63661.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
hypothetical protein
04302015_12_scaffold_707_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7624..8595)
DNA (972bp) protein (324aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC63662.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFC63662.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003037DFB rbh
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase rbh
04302015_12_scaffold_707_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8780..9541)
DNA (762bp) protein (254aa)
UPI0003CE2281 related cluster n=1 Tax=unknown RepID=UPI0003CE2281
Putative transcriptional regulatory protein, GntR family, HTH {ECO:0000313|EMBL:KFC63663.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea
GntR family transcriptional regulator
04302015_12_scaffold_707_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9806..10864
DNA (1059bp) protein (353aa)
ABC transporter related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM67_METNO rbh
ABC transporter related protein {ECO:0000313|EMBL:KFC63664.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein
04302015_12_scaffold_707_14
bacterium YEK0313, Bacteria

Not on your lists

10975..12300
DNA (1326bp) protein (442aa)
Extracellular solute-binding protein family 1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM68_METNO rbh
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CEJ10905.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
04302015_12_scaffold_707_15
bacterium YEK0313, Bacteria

Not on your lists

12448..13395
DNA (948bp) protein (316aa)
Multiple sugar transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H758_9BRAD rbh
Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:CEJ10906.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
04302015_12_scaffold_707_16
bacterium YEK0313, Bacteria

Not on your lists

13388..14296
DNA (909bp) protein (303aa)
Multiple sugar transport system permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I9U1_9BRAD rbh
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:CEJ10907.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
04302015_12_scaffold_707_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14473..15366
DNA (894bp) protein (298aa)
Putative 6-phosphogluconate dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZA68_AZOL4 rbh
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KFC63668.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
putative 6-phosphogluconate dehydrogenase rbh
04302015_12_scaffold_707_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15383..16459)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0B575 rbh
Putative transcriptional regulatory protein, LacI family {ECO:0000313|EMBL:KFC63669.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" s
lacI; transcriptional regulator
04302015_12_scaffold_707_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16563..17474
DNA (912bp) protein (304aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM63_RHISN rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC63670.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_707_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17491..18252)
DNA (762bp) protein (254aa)
Asp/Glu/hydantoin racemase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LD77_9RHIZ
Hydantoin racemase {ECO:0000313|EMBL:KFC63573.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Asp/Glu/hydantoin racemase
04302015_12_scaffold_707_21
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18425..19525
DNA (1101bp) protein (367aa)
UPI0003D0671F related cluster n=1 Tax=unknown RepID=UPI0003D0671F rbh
LpqC, poly {ECO:0000313|EMBL:ESZ69922.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;
esterase, phb depolymerase family rbh
04302015_12_scaffold_707_22
unknown

Not on your lists

19590..19760
DNA (171bp) protein (57aa)

This feature has no annotations

04302015_12_scaffold_707_23
unknown

Not on your lists

19757..19939
DNA (183bp) protein (61aa)

This feature has no annotations

04302015_12_scaffold_707_trna_1
unknown

Not on your lists

comp(19983..20064)
DNA (82bp)
transferRNA
04302015_12_scaffold_707_24
unknown

Not on your lists

20553..20717
DNA (165bp) protein (55aa)

This feature has no annotations

04302015_12_scaffold_707_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20745..21302)
DNA (558bp) protein (186aa)
Restriction endonuclease n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT92_9RHIZ
HNH endonuclease domain protein {ECO:0000313|EMBL:KFC73272.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HNH endonuclease rbh
04302015_12_scaffold_707_26
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21608..21697)
DNA (90bp) protein (30aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KFG67687.1}; EC=1.1.1.157 {ECO:0000313|EMBL:KFG67687.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylo
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTF4_9RHIZ
Displaying 27 items

View Taxonomy