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04302015_12_scaffold_815

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_815_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..366
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UE55_9RHOB
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:KFC74318.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source=
branched-chain amino acid transport
04302015_12_scaffold_815_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376..804)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MK44_9RHOB
Histidine triad (HIT) protein {ECO:0000313|EMBL:KFC74321.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HIT family hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
04302015_12_scaffold_815_3
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(865..1674)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003618816
Uncharacterized protein {ECO:0000313|EMBL:KFG69758.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
04302015_12_scaffold_815_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1667..2878)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZY3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC74323.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein; K09919 hypothetical protein
04302015_12_scaffold_815_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2875..3555)
DNA (681bp) protein (227aa)
Putative glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KFC74324.1}; EC=3.1.4.46 {ECO:0000313|EMBL:KFC74324.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D8E14F
glycerophosphoryl diester phosphodiesterase
04302015_12_scaffold_815_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3603..3998)
DNA (396bp) protein (132aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZY5_9RHIZ
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:KFC74325.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
04302015_12_scaffold_815_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4121..4957
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IN42_METNO
Uncharacterized protein {ECO:0000313|EMBL:KFC74326.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_815_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4914..6272)
DNA (1359bp) protein (453aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1502851 species="Bacteria; Proteobacteria; Al
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZY7_9RHIZ rbh
04302015_12_scaffold_815_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6269..6559)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003767C2E
Uncharacterized protein {ECO:0000313|EMBL:KFC74328.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_815_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6675..7073
DNA (399bp) protein (133aa)
Response regulator receiver protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y0E6_9RHIZ
Response regulator receiver protein {ECO:0000313|EMBL:KFC74329.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
response regulator receiver; K11443 two-component system, cell cycle response regulator DivK
04302015_12_scaffold_815_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7092..8468
DNA (1377bp) protein (459aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFA3_METS4 rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:KFC74330.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sour
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator rbh
04302015_12_scaffold_815_12
unknown

Not on your lists

comp(8726..8926)
DNA (201bp) protein (67aa)

This feature has no annotations

04302015_12_scaffold_815_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..9371)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z997_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC69294.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_815_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9492..9659)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036EF993
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
04302015_12_scaffold_815_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9816..10550)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031B4351 rbh
NUDIX hydrolase {ECO:0000313|EMBL:KFC74334.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_815_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10547..10993)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00038125CA
Uncharacterized protein {ECO:0000313|EMBL:KFC74335.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
04302015_12_scaffold_815_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10993..11772)
DNA (780bp) protein (260aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502851 species="Bacteria; Proteobacteria; Alp
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-]
Ribonuclease R n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WRY6_9RHIZ
04302015_12_scaffold_815_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11733..13271)
DNA (1539bp) protein (513aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502851 species="Bacteria; Proteobacteria; Alp
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037C5CCC
04302015_12_scaffold_815_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13971..15200
DNA (1230bp) protein (410aa)
Urea ABC transporter, urea binding protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUW1_9BRAD rbh
Urea ABC transporter, urea binding protein {ECO:0000313|EMBL:KFC74337.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea s
urea ABC transporter urea-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
04302015_12_scaffold_815_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15349..16950
DNA (1602bp) protein (534aa)
ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4Q4_AZOC5
Urea ABC transporter, permease UrtB {ECO:0000313|EMBL:KFC74338.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
04302015_12_scaffold_815_21
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16839..17072)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ABT8_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57973.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
04302015_12_scaffold_815_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17183..18070
DNA (888bp) protein (296aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89UG7_BRADU
Urea ABC transporter, permease protein UrtC {ECO:0000313|EMBL:KFC74339.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
04302015_12_scaffold_815_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18067..18831
DNA (765bp) protein (255aa)
Probable ATP-binding component of ABC transporter n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98M30_RHILO rbh
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:KFC74340.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bos
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
04302015_12_scaffold_815_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18828..19529
DNA (702bp) protein (234aa)
Putative branched-chain amino acid ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:KFC74341.1}; EC=3.6.3.- {ECO:0000313|EMBL:KFC74341.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alph
urea ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003122252 rbh
urea ABC transporter ATP-binding protein UrtE; K01996 branched-chain amino acid transport system ATP-binding protein rbh
04302015_12_scaffold_815_25
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19660..20772
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) PF8_XANP2">RepID=A7IPF8_XANP2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69904.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
04302015_12_scaffold_815_26
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20818..21090)
DNA (273bp) protein (91aa)
AsnC family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F254A0
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIZ85919.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
04302015_12_scaffold_815_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21314..22315
DNA (1002bp) protein (334aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Microvirga sp. WSM3557 RepID=I4YR72_9RHIZ rbh
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:KFC74344.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source=
04302015_12_scaffold_815_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..22849
DNA (528bp) protein (176aa)
gntK; gluconate kinase (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Gluconate kinase 2 gluconate transport, GNT I system n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B1S3_METEA
Uncharacterized protein {ECO:0000313|EMBL:KFC74345.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
04302015_12_scaffold_815_29
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22865..23266)
DNA (402bp) protein (134aa)
Membrane protein-like protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIE4_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN53494.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoeni
04302015_12_scaffold_815_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23266..24717)
DNA (1452bp) protein (484aa)
Multicopper oxidase type 3 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UD16_METS4 rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:KFC69044.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multicopper oxidase type 3 rbh
Displaying items 1-30 of 39 in total

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