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04302015_12_scaffold_32

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Displaying items 1-30 of 396 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_32_trna_10
unknown

Not on your lists

comp(58..130)
DNA (73bp)
transferRNA
04302015_12_scaffold_32_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240..1355)
DNA (1116bp) protein (372aa)
Cell elongation-specific peptidoglycan biosynthesis regulator RodA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F2_NOVAD rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA rbh
Cell elongation-specific peptidoglycan biosynthesis regulator RodA {ECO:0000313|EMBL:ABD26571.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
04302015_12_scaffold_32_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..3433)
DNA (2079bp) protein (693aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ABD26570.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABD26570.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 rbh
Peptidoglycan glycosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F3_NOVAD rbh
04302015_12_scaffold_32_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3439..3993)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F4_NOVAD
hypothetical protein; K03571 rod shape-determining protein MreD
Uncharacterized protein {ECO:0000313|EMBL:ABD26569.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_32_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3990..4895)
DNA (906bp) protein (302aa)
Cell shape-determining protein MreC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F5_NOVAD rbh
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC rbh
Rod shape-determining protein MreC {ECO:0000313|EMBL:ABD26568.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
04302015_12_scaffold_32_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5007..6053)
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F6_NOVAD rbh
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:ABD26567.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
04302015_12_scaffold_32_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6242..8041
DNA (1800bp) protein (600aa)
DNA mismatch repair protein MutL n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F7_NOVAD rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL rbh
04302015_12_scaffold_32_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8043..8534
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6F8_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26565.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_32_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8639..9739)
DNA (1101bp) protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6G3_NOVAD rbh
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
04302015_12_scaffold_32_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9848..11386
DNA (1539bp) protein (513aa)
TPR repeat protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6G6_NOVAD rbh
TPR repeat-containing protein rbh
TPR repeat protein {ECO:0000313|EMBL:ABD26557.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
04302015_12_scaffold_32_10
Serendipita vermifera, Serendipita, Sebacinales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

11656..12087
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Solanum tuberosum RepID=M1CWM1_SOLTU
Uncharacterized protein {ECO:0000313|EMBL:KIM21631.1}; TaxID=933852 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Sebacinales; Sebacinales group B; Serendipita.;"
uncharacterized LOC100777472
04302015_12_scaffold_32_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12184..12753)
DNA (570bp) protein (190aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] rbh
Peptidyl-tRNA hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PTH_NOVAD rbh
04302015_12_scaffold_32_12
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12996..13601)
DNA (606bp) protein (202aa)
50S ribosomal protein L25 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RL25_NOVAD rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=48936 spe
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 rbh
04302015_12_scaffold_32_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13904..15319)
DNA (1416bp) protein (472aa)
Type II secretion system protein E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G777_NOVAD
Type II secretion system protein E {ECO:0000313|EMBL:KHS48372.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
type II secretion system protein E; K02283 pilus assembly protein CpaF
04302015_12_scaffold_32_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15679..16587
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G776_NOVAD rbh
EamA-like transporter family protein {ECO:0000313|EMBL:KHS48378.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
hypothetical protein; K15270 S-adenosylmethionine uptake transporter rbh
04302015_12_scaffold_32_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..18144
DNA (1416bp) protein (472aa)
Major facilitator superfamily MFS_1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G756_NOVAD rbh
major facilitator transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD26317.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
04302015_12_scaffold_32_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18141..20234
DNA (2094bp) protein (698aa)
glycoside hydrolase, clan GH-D; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Glycoside hydrolase, clan GH-D n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G755_NOVAD rbh
Glycoside hydrolase, clan GH-D {ECO:0000313|EMBL:ABD26318.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
04302015_12_scaffold_32_17
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20258..21391
DNA (1134bp) protein (378aa)
levansucrase (EC:2.4.1.10); K00692 levansucrase [EC:2.4.1.10] rbh
Levansucrase {ECO:0000313|EMBL:ABD26319.1}; EC=2.4.1.10 {ECO:0000313|EMBL:ABD26319.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosp
Levansucrase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G754_NOVAD rbh
04302015_12_scaffold_32_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..22414)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G753_NOVAD rbh
LacI family transcription regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABD26320.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
04302015_12_scaffold_32_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22679..25180
DNA (2502bp) protein (834aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G752_NOVAD rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS48402.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
TonB-dependent receptor rbh
04302015_12_scaffold_32_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25350..26852
DNA (1503bp) protein (501aa)
tryptophan halogenase; K14266 FADH2 O2-dependent halogenase I [EC:1.14.14.7] rbh
Tryptophan halogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G751_NOVAD rbh
Tryptophan halogenase {ECO:0000313|EMBL:KHS48403.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
04302015_12_scaffold_32_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26855..28225
DNA (1371bp) protein (457aa)
TPR repeat protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G750_NOVAD rbh
TPR repeat-containing protein {ECO:0000313|EMBL:KHS48404.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
TPR repeat-containing protein rbh
04302015_12_scaffold_32_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28227..29555
DNA (1329bp) protein (443aa)
glycoside hydrolase; K01212 levanase [EC:3.2.1.65] rbh
Glycoside hydrolase, family 32 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G749_NOVAD rbh
Glycoside hydrolase {ECO:0000313|EMBL:KHS48405.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
04302015_12_scaffold_32_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29534..30433)
DNA (900bp) protein (300aa)
Fructokinase {ECO:0000313|EMBL:KHS48406.1}; EC=2.7.1.4 {ECO:0000313|EMBL:KHS48406.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphi
fructokinase (EC:2.7.1.4); K00847 fructokinase [EC:2.7.1.4] rbh
Fructokinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G748_NOVAD rbh
04302015_12_scaffold_32_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30606..32255
DNA (1650bp) protein (550aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase, catalytic region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G742_NOVAD rbh
Alpha amylase {ECO:0000313|EMBL:KHS48412.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterr
04302015_12_scaffold_32_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32255..34303
DNA (2049bp) protein (683aa)
alpha-glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha-glucosidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G741_NOVAD rbh
Alpha-glucosidase {ECO:0000313|EMBL:ABD26332.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
04302015_12_scaffold_32_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34514..35962
DNA (1449bp) protein (483aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] rbh
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G740_NOVAD rbh
04302015_12_scaffold_32_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35955..36581
DNA (627bp) protein (209aa)
6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase {ECO:0000313|EMBL:ABD26334.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ABD26334.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonad
6-phosphogluconolactonase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G739_NOVAD rbh
04302015_12_scaffold_32_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36581..38401
DNA (1821bp) protein (607aa)
phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12] rbh
6-phosphogluconate dehydratase {ECO:0000313|EMBL:ABD26335.1}; EC=4.2.1.12 {ECO:0000313|EMBL:ABD26335.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
6-phosphogluconate dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G738_NOVAD rbh
04302015_12_scaffold_32_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38440..39408
DNA (969bp) protein (323aa)
Glucokinase {ECO:0000313|EMBL:KHS48418.1}; EC=2.7.1.2 {ECO:0000313|EMBL:KHS48418.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] rbh
Glucokinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G737_NOVAD rbh
Displaying items 1-30 of 396 in total

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