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04302015_12_scaffold_238

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_238_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103..1566)
DNA (1464bp) protein (488aa)
asnB; asparagine synthetase B; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
UPI0003CFBECB related cluster n=1 Tax=unknown RepID=UPI0003CFBECB
Uncharacterized protein {ECO:0000313|EMBL:ESZ10221.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
04302015_12_scaffold_238_2
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1734..2234
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WF87_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYD75061.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
04302015_12_scaffold_238_3
unknown

Not on your lists

2657..2881
DNA (225bp) protein (75aa)

This feature has no annotations

04302015_12_scaffold_238_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2915..3634
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G399_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27674.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_238_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3922..4176
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G392_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27681.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_238_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4635..6005
DNA (1371bp) protein (457aa)
O-antigen polymerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G391_NOVAD rbh
O-antigen polymerase rbh
O-antigen polymerase {ECO:0000313|EMBL:ABD27682.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
04302015_12_scaffold_238_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6005..6709
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G390_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27683.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_238_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6861..7415)
DNA (555bp) protein (185aa)
OstA-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G389_NOVAD
OstA-like protein; K09774 lipopolysaccharide export system protein LptA
OstA-like protein {ECO:0000313|EMBL:ABD27684.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
04302015_12_scaffold_238_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..8108)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G388_NOVAD rbh
hypothetical protein; K11719 lipopolysaccharide export system protein LptC rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD27685.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_238_10
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8150..8755)
DNA (606bp) protein (202aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] rbh
3'-5' exonuclease n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G387_NOVAD rbh
3'-5' exonuclease {ECO:0000313|EMBL:KHS42048.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
04302015_12_scaffold_238_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8912..9172
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G384_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27689.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_238_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9243..10091)
DNA (849bp) protein (283aa)
Metallophosphoesterase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G317_NOVAD rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ABD27756.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
04302015_12_scaffold_238_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10126..10983)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G316_NOVAD rbh
Sphingosine kinase {ECO:0000313|EMBL:KHS46873.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium su
hypothetical protein rbh
04302015_12_scaffold_238_14
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11033..11308)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G315_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27758.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_238_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11614..11913
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G314_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27759.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_238_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12014..12508)
DNA (495bp) protein (165aa)
Putative transcriptional regulator n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G313_NOVAD
Transcriptional regulator {ECO:0000313|EMBL:KHS46876.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
transcriptional regulator
04302015_12_scaffold_238_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13044
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G312_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46877.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_238_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13172..13855
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G311_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27762.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
04302015_12_scaffold_238_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13902..14300
DNA (399bp) protein (133aa)
protein-methionine-S-oxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G310_NOVAD
04302015_12_scaffold_238_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14449..16611
DNA (2163bp) protein (721aa)
penicillin-binding protein 1A (EC:2.4.1.129) rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:ABD27764.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABD27764.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
Penicillin-binding protein 1A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G309_NOVAD rbh
04302015_12_scaffold_238_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..17138
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G308_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46881.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_238_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17143..18012)
DNA (870bp) protein (290aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PANC_NOVAD rbh
04302015_12_scaffold_238_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18114..18965
DNA (852bp) protein (284aa)
ATPases involved in chromosome partitioning-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G320_NOVAD rbh
Chromosome partitioning ATPase-like protein {ECO:0000313|EMBL:KHS46869.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
chromosome partitioning ATPase-like; K03496 chromosome partitioning protein rbh
04302015_12_scaffold_238_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18965..19255
DNA (291bp) protein (97aa)
Heat shock protein DnaJ-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G321_NOVAD
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:KHS46868.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
heat shock protein DnaJ-like protein
04302015_12_scaffold_238_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19262..20668
DNA (1407bp) protein (469aa)
Phosphomannomutase {ECO:0000313|EMBL:KHS46867.1}; EC=5.4.2.8 {ECO:0000313|EMBL:KHS46867.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] rbh
Phosphomannomutase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G322_NOVAD rbh
04302015_12_scaffold_238_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20739..22457
DNA (1719bp) protein (573aa)
Heat shock protein Hsp70 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G324_NOVAD rbh
Molecular chaperone DnaK {ECO:0000313|EMBL:KHS46865.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
molecular chaperone DnaK; K04045 molecular chaperone HscC rbh
04302015_12_scaffold_238_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22476..24284
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G325_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS46864.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein rbh
04302015_12_scaffold_238_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24447..26069
DNA (1623bp) protein (541aa)
DEAD/DEAH box helicase-like protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/DEAH box helicase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G326_NOVAD
DEAD/DEAH box helicase-like protein {ECO:0000313|EMBL:KHS46863.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
04302015_12_scaffold_238_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26048..26836
DNA (789bp) protein (263aa)
DEAD/DEAH box helicase-like protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/DEAH box helicase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G326_NOVAD
DEAD/DEAH box helicase-like protein {ECO:0000313|EMBL:KHS46863.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
Displaying 29 items

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