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04302015_12_scaffold_51_24

Organism: 04302015_12_Novosphingobium_62_10

near complete RP 49 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 8 / 38
Location: 24868..26178

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 436.0
  • Bit_score: 865
  • Evalue 3.70e-248
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 436.0
  • Bit_score: 816
  • Evalue 3.40e-234
  • rbh
Serine hydroxymethyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GLYA_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 436.0
  • Bit_score: 816
  • Evalue 1.10e-233
  • rbh

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGACCACCGCCACGCTAGCGCCGGAAATCCGTAAAGCCGGCTTCTTTACCGAGCATCTGGAAACCGCCGACGCCGAAGTCTTCGCCGCGATCAAGGGCGAGTTGCACCGCCAGCAGACCAAGATCGAACTGATCGCCAGCGAGAACATCACGAGCCGCGCCGTGCTCGAAGCCACCGGCTCGGTCTTCACCAACAAGTATGCCGAAGGCTATCCGGGCAAGCGCTACTACGGCGGCTGCGAATATGCCGATATCGTCGAAAATCTGGCCATCGAACGCGCCAAGCAGCTGTTCGGCTGCAATTTCGCCAACGTGCAGCCCAATTCGGGCAGCCAGATGAATCAGGCCGTGTTCCTCGCGCTGCTGCAGCCCGGTGACAGCTTCATGGGGCTGGACCTGAACTCGGGCGGCCACCTCACGCACGGCTCGCCCGTCAACATGAGCGGCAAGTGGTTCAACGTGATCCCCTATGGCGTGCGCCCGGACGATCACATGATCGACATGGACGAGGTTGCACGCCTTGCCCGCGAGCATAAGCCCAAGCTGATCATCGCCGGCGGCACCGCCTATTCGCGCACCTGGGATTGGGCGGCTTTCCGCGCCATTGCTGATGAAATCGGCGCATGGCTGCTGGTCGATATGTCGCACATCTCAGGTCTGGTCGCAGGCGGCGCACACCCCTCGCCCTTCCCCCATGCCCATGTCGTCACCAGCACCACGCACAAGTCTTTGCGCGGTCCGCGTTCGGGCATCATCCTGACGAATGACGAAGATCTGGCCAAGAAGTTCAACATGGCGGTGTTCCCCGGCATGCAGGGCGGGCCGCTCGTCCACGTGATCGCGGGCAAGGCCGTCGCCTTTGGTGAGGCGCTGCGCCCTGAATTCAAAGCCTATGCCCACCAGATCGTCAGCAATGCCAAGGCTCTGGCCGAAAGCGTCAAGGATGCAGGCCTGGGCATCGTTTCGGGCGGCACCGACAACCACCTGATGCTCGTCGATCTGACTGCCAAGGACGTGACCGGCAAGGCCGCGGAAAAGGGCCTCGATCGCGCATGGCTCACCTGCAACAAGAATGGCGTGCCGTTTGACAAGCGCTCGCCCTTCGTCACCTCGGGCATCCGCCTTGGCACGCCTGCAGGCACCACGCGCGGCTTCCGCGAGGACGAATTCCGCCTGATCGGCAAGCTGATCGTCGAAGTCGTCGATGGCCTTGCGCGCAATGGCGATGAGGGCGACGGGCAAGTTGAACAGCGCGTACGCGATCAGGTTGCCGAACTGTGCGCACGCTTCCCGATCTACCCGGAGCTGTAA
PROTEIN sequence
Length: 437
MTTATLAPEIRKAGFFTEHLETADAEVFAAIKGELHRQQTKIELIASENITSRAVLEATGSVFTNKYAEGYPGKRYYGGCEYADIVENLAIERAKQLFGCNFANVQPNSGSQMNQAVFLALLQPGDSFMGLDLNSGGHLTHGSPVNMSGKWFNVIPYGVRPDDHMIDMDEVARLAREHKPKLIIAGGTAYSRTWDWAAFRAIADEIGAWLLVDMSHISGLVAGGAHPSPFPHAHVVTSTTHKSLRGPRSGIILTNDEDLAKKFNMAVFPGMQGGPLVHVIAGKAVAFGEALRPEFKAYAHQIVSNAKALAESVKDAGLGIVSGGTDNHLMLVDLTAKDVTGKAAEKGLDRAWLTCNKNGVPFDKRSPFVTSGIRLGTPAGTTRGFREDEFRLIGKLIVEVVDGLARNGDEGDGQVEQRVRDQVAELCARFPIYPEL*