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04302015_12_scaffold_51

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Displaying items 1-30 of 217 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_51_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141..3068)
DNA (2928bp) protein (976aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G670_NOVAD rbh
TonB-dependent receptor {ECO:0000313|EMBL:KHS49096.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
TonB-dependent receptor rbh
04302015_12_scaffold_51_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3414..3833
DNA (420bp) protein (140aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RISB_NOVAD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
04302015_12_scaffold_51_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3856..4962)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G666_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS49100.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
04302015_12_scaffold_51_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4962..6050)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G665_NOVAD rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KHS49101.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
hypothetical protein rbh
04302015_12_scaffold_51_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6215..6478
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G664_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26659.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_51_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6693..7220
DNA (528bp) protein (176aa)
Regulatory protein, MarR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G663_NOVAD
Regulatory protein, MarR {ECO:0000313|EMBL:KHS49103.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
regulatory protein, MarR
04302015_12_scaffold_51_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7296..8582)
DNA (1287bp) protein (429aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] rbh
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=ENO_NOVAD rbh
04302015_12_scaffold_51_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8838..9431
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G661_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49105.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_51_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9465..9854
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G660_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49106.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_51_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9851..10135
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G659_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26664.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_51_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10137..10640
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G658_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49108.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_51_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10743..10964
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G657_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26666.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
04302015_12_scaffold_51_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11200..11676)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GREA_NOVAD
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteoba
04302015_12_scaffold_51_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11804..15127)
DNA (3324bp) protein (1108aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; S
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase large chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G655_NOVAD rbh
04302015_12_scaffold_51_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15503..16744)
DNA (1242bp) protein (414aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G654_NOVAD rbh
04302015_12_scaffold_51_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16906..17361
DNA (456bp) protein (152aa)
GatB/Yqey n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G653_NOVAD
hypothetical protein; K09117 hypothetical protein
GatB/Yqey {ECO:0000313|EMBL:ABD26670.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticiv
04302015_12_scaffold_51_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17478..17921
DNA (444bp) protein (148aa)
Excinuclease ABC subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQ95_9SPHN
Excinuclease ABC subunit C {ECO:0000313|EMBL:ENY80630.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxi
excinuclease ABC subunit C
04302015_12_scaffold_51_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17912..19777
DNA (1866bp) protein (622aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=279238 species="Bacteria; Proteobacter
DNA primase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G652_NOVAD rbh
04302015_12_scaffold_51_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19843..21846
DNA (2004bp) protein (668aa)
RNA polymerase sigma factor RpoD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G651_NOVAD rbh
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
04302015_12_scaffold_51_20
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21843..22457
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WII5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO98888.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
04302015_12_scaffold_51_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22471..22926)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G649_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49118.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_51_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22923..24215)
DNA (1293bp) protein (431aa)
Monooxygenase, FAD-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G648_NOVAD rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:KHS49119.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
hypothetical protein rbh
04302015_12_scaffold_51_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24416..24853
DNA (438bp) protein (146aa)
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:KHS49120.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KHS49120.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose-5-phosphate isomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G647_NOVAD
04302015_12_scaffold_51_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24868..26178
DNA (1311bp) protein (437aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GLYA_NOVAD rbh
04302015_12_scaffold_51_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26182..26658
DNA (477bp) protein (159aa)
Transcriptional repressor NrdR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NRDR_NOVAD
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR
04302015_12_scaffold_51_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26655..27410
DNA (756bp) protein (252aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
tRNA/rRNA methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] rbh
tRNA/rRNA methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G643_NOVAD rbh
04302015_12_scaffold_51_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27754..28365
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS4_NOVAD rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 rbh
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
04302015_12_scaffold_51_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28481..28720
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G640_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS49127.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_51_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28853..29977)
DNA (1125bp) protein (375aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] rbh
Queuine tRNA-ribosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TGT_NOVAD rbh
04302015_12_scaffold_51_30
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30040..30828
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G638_NOVAD rbh
Putative permease {ECO:0000313|EMBL:KHS49129.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
hypothetical protein; K07090 rbh
Displaying items 1-30 of 217 in total

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