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04302015_12_scaffold_253

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_253_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295..564)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z972_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55478.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
04302015_12_scaffold_253_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(575..2227)
DNA (1653bp) protein (551aa)
Beta-lactamase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G602_NOVAD
Beta-lactamase-like protein {ECO:0000313|EMBL:KHS49166.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
beta-lactamase-like protein; K07021
04302015_12_scaffold_253_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..3031)
DNA (789bp) protein (263aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-R
Type III pantothenate kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=COAX_NOVAD
04302015_12_scaffold_253_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3031..3747)
DNA (717bp) protein (239aa)
Biotin--protein ligase {ECO:0000313|EMBL:GAO55475.1}; EC=6.3.4.10 {ECO:0000313|EMBL:GAO55475.1};; EC=6.3.4.11 {ECO:0000313|EMBL:GAO55475.1};; EC=6.3.4.12 {ECO:0000313|EMBL:GAO55475.1};; EC=6.3.4.9 {EC
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G600_NOVAD
04302015_12_scaffold_253_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3767..5233)
DNA (1467bp) protein (489aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH dehydrogenase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B739CC rbh
04302015_12_scaffold_253_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5233..6786)
DNA (1554bp) protein (518aa)
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:GAO55473.1}; EC=1.6.5.3 {ECO:0000313|EMBL:GAO55473.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
NADH dehydrogenase subunit M n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Z8_NOVAD
04302015_12_scaffold_253_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6783..8828)
DNA (2046bp) protein (682aa)
NADH dehydrogenase subunit L {ECO:0000313|EMBL:KHS49171.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KHS49171.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
NADH dehydrogenase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH dehydrogenase subunit L n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Z7_NOVAD
04302015_12_scaffold_253_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8833..9138)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-ubiquinone oxidoreductase, chain 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z965_9SPHN
04302015_12_scaffold_253_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9135..9752)
DNA (618bp) protein (206aa)
NADH-ubiquinone oxidoreductase chain J {ECO:0000313|EMBL:GAO55470.1}; EC=1.6.5.3 {ECO:0000313|EMBL:GAO55470.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
NADH dehydrogenase I subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) n=1 Tax=Novosphingobium sp. AP12 RepID=J2GQ20_9SPHN
04302015_12_scaffold_253_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9765..10250)
DNA (486bp) protein (162aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NUOI_NOVAD
04302015_12_scaffold_253_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10247..11293)
DNA (1047bp) protein (349aa)
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NUOH_NOVAD rbh
04302015_12_scaffold_253_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..13299)
DNA (2010bp) protein (670aa)
NADH dehydrogenase subunit G (EC:1.6.5.3); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH dehydrogenase subunit G {ECO:0000313|EMBL:ABD26731.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABD26731.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
NADH dehydrogenase subunit G n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Z2_NOVAD
04302015_12_scaffold_253_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13642..14934)
DNA (1293bp) protein (431aa)
NADH-ubiquinone oxidoreductase chain F {ECO:0000313|EMBL:GAO55465.1}; EC=1.6.5.3 {ECO:0000313|EMBL:GAO55465.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
NADH dehydrogenase I subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH dehydrogenase subunit F n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Z1_NOVAD
04302015_12_scaffold_253_14
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14938..15606)
DNA (669bp) protein (223aa)
NADH dehydrogenase I subunit E (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] rbh
NADH dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B32BF9 rbh
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:EGD58921.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
04302015_12_scaffold_253_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15611..15829)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00037443C8
Uncharacterized protein {ECO:0000313|EMBL:KHS49179.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_12_scaffold_253_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15802..16155)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y7_NOVAD
SnoaL-like domain protein {ECO:0000313|EMBL:KHS49180.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
04302015_12_scaffold_253_17
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16556..17767)
DNA (1212bp) protein (404aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HIP3_9SPHN rbh
04302015_12_scaffold_253_18
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17764..18609)
DNA (846bp) protein (282aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000255|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NUOC_NOVAD rbh
04302015_12_scaffold_253_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18620..19177)
DNA (558bp) protein (186aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH dehydrogenase subunit B (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z955_9SPHN rbh
04302015_12_scaffold_253_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19174..19560)
DNA (387bp) protein (129aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y3_NOVAD
04302015_12_scaffold_253_21
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19706..21136)
DNA (1431bp) protein (477aa)
aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
Aldehyde dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z953_9SPHN rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
04302015_12_scaffold_253_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21149..21946)
DNA (798bp) protein (266aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=48936
type 4 prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y1_NOVAD
04302015_12_scaffold_253_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21998..23266
DNA (1269bp) protein (423aa)
Acetyl-CoA C-acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y0_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55456.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
04302015_12_scaffold_253_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23433..23933)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003666EED
Uncharacterized protein {ECO:0000313|EMBL:EGD58931.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
04302015_12_scaffold_253_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24171..24788
DNA (618bp) protein (206aa)
glycolate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26]
Glycolate reductase {ECO:0000313|EMBL:ABD26745.1}; EC=1.1.1.26 {ECO:0000313|EMBL:ABD26745.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Glycolate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X8_NOVAD
04302015_12_scaffold_253_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24775..24960
DNA (186bp) protein (62aa)
glycolate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26]
2-hydroxyacid dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B47065
Uncharacterized protein {ECO:0000313|EMBL:GAO55454.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
04302015_12_scaffold_253_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25205..26416
DNA (1212bp) protein (404aa)
Ammonium transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X7_NOVAD
ammonium transporter; K03320 ammonium transporter, Amt family
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
04302015_12_scaffold_253_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26947..28356)
DNA (1410bp) protein (470aa)
2-nitropropane dioxygenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B42B8F rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KHS49194.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
2-nitropropane dioxygenase
04302015_12_scaffold_253_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28366..29103)
DNA (738bp) protein (246aa)
Generic methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X3_NOVAD
Gll3385 protein {ECO:0000313|EMBL:GAO55450.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
generic methyltransferase
04302015_12_scaffold_253_30
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29100..30227)
DNA (1128bp) protein (376aa)
peptide chain release factor 2 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40114
peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaprot
Displaying items 1-30 of 38 in total

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