ggKbase home page

04302015_12_scaffold_199

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_199_1
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1223)
DNA (1221bp) protein (407aa)
TonB-dependent receptor plug n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHA5_BRESC
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADL01071.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;"
04302015_12_scaffold_199_2
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2429
DNA (1038bp) protein (346aa)
Transcriptional regulator, LacI family n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHA6_BRESC rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADL01072.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="B
04302015_12_scaffold_199_3
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2437..4908)
DNA (2472bp) protein (824aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHA7_BRESC rbh
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ADL01073.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Br
glycoside hydrolase rbh
04302015_12_scaffold_199_4
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5020..5859
DNA (840bp) protein (280aa)
Licheninase (EC:3.2.1.73) rbh
Licheninase {ECO:0000313|EMBL:ADL01074.1}; EC=3.2.1.73 {ECO:0000313|EMBL:ADL01074.1};; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobac
Licheninase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHA8_BRESC rbh
04302015_12_scaffold_199_5
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6084..6347
DNA (264bp) protein (88aa)
Transposase subfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WF73_9CAUL
Transposase subfamily {ECO:0000313|EMBL:EDX80933.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp.
insertion sequence IS407 uncharacterized 10.0 kDa protein
04302015_12_scaffold_199_6
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..6589
DNA (204bp) protein (68aa)
Integrase core domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WF72_9CAUL
Integrase core domain protein {ECO:0000313|EMBL:EDX80861.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimo
transposase, IS1477
04302015_12_scaffold_199_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6946..7962
DNA (1017bp) protein (339aa)
Transcriptional regulator, AraC family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RID2_PHEZH
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACG80107.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source
04302015_12_scaffold_199_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8055..10355
DNA (2301bp) protein (767aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB65_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL96706.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
TonB-dependent receptor
04302015_12_scaffold_199_9
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10364..11335
DNA (972bp) protein (324aa)
Esterase/lipase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Y1Y3_9ALTE
Carboxylesterase NlhH {ECO:0000313|EMBL:GAK32708.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
04302015_12_scaffold_199_10
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11373..12638
DNA (1266bp) protein (422aa)
Lipase class 2 n=1 Tax=Alishewanella agri BL06 RepID=I9P409_9ALTE rbh
Lipase class 2 {ECO:0000313|EMBL:EIW89574.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL06.
hypothetical protein
04302015_12_scaffold_199_11
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13435..15039)
DNA (1605bp) protein (535aa)
Solute:Na+ symporter, SSS family n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TCH5_9ALTE rbh
Solute:Na+ symporter, SSS family {ECO:0000313|EMBL:GAB56002.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecol
SSS sodium solute transporter superfamily protein rbh
04302015_12_scaffold_199_12
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15036..16028)
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Vibrio coralliilyticus RepID=C9NY22_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:CEO88056.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophacetic
hypothetical protein
04302015_12_scaffold_199_13
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16025..16753)
DNA (729bp) protein (243aa)
Putative NAD-binding domain 4 protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ04_9GAMM
Putative NAD-binding domain 4 protein {ECO:0000313|EMBL:EEB78420.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium
short-chain dehydrogenase/reductase SDR
04302015_12_scaffold_199_14
Microbacterium sp. Gsoil167, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16750..18051)
DNA (1302bp) protein (434aa)
Glycoside hydrolase {ECO:0000313|EMBL:AGA60135.1}; EC=3.2.1.- {ECO:0000313|EMBL:AGA60135.1};; TaxID=1271882 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sourc
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase; K05350 beta-glucosidase [EC:3.2.1.21] rbh
Glycoside hydrolase n=1 Tax=Microbacterium sp. Gsoil167 RepID=L0ELG0_9MICO rbh
04302015_12_scaffold_199_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18157..19461
DNA (1305bp) protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
histidinol dehydrogenase (EC:1.1.1.23); K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308]
Histidinol dehydrogenase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2Z8_9PROT
04302015_12_scaffold_199_16
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19466..20500
DNA (1035bp) protein (345aa)
UPI0003CFC64B related cluster n=1 Tax=unknown RepID=UPI0003CFC64B rbh
LacI family transcription regulator {ECO:0000313|EMBL:ESZ87912.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Bla
LacI family transcriptional regulator
04302015_12_scaffold_199_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20497..21195
DNA (699bp) protein (233aa)
Alpha/beta hydrolase family protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XH14_VARPD
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AGU51604.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora
04302015_12_scaffold_199_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21192..22346
DNA (1155bp) protein (385aa)
Methionine synthase, vitamin-B12 independent, putative {ECO:0000313|EMBL:EEB78439.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EEB78439.1};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; O
Methionine synthase, vitamin-B12 independent, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYZ9_9GAMM rbh
hypothetical protein rbh
04302015_12_scaffold_199_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22343..23104
DNA (762bp) protein (254aa)
aldolase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6DB42
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:GAO53070.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
HpcH/HpaI aldolase
04302015_12_scaffold_199_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23168..25435)
DNA (2268bp) protein (756aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E84F rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO53068.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
04302015_12_scaffold_199_21
unknown

Not on your lists

comp(25585..26205)
DNA (621bp) protein (207aa)

This feature has no annotations

04302015_12_scaffold_199_22
Glaciecola pallidula, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26202..27290)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6ZWF0_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC27650.1}; TaxID=1121922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola pallidu
hypothetical protein
04302015_12_scaffold_199_23
Alteromonas sp. ALT199, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27290..28498)
DNA (1209bp) protein (403aa)
Cupin 2 conserved barrel domain-containing protein n=1 Tax=Alteromonas macleodii (strain Balearic Sea AD45) RepID=K0EJN0_ALTMB rbh
Cupin domain-containing protein {ECO:0000313|EMBL:EXF47784.1}; TaxID=1298865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromon
cupin rbh
Displaying 23 items

View Taxonomy