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04302015_12_scaffold_3258

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_3258_1
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Clostridium sp. CAG:122 RepID=R5S690_9CLOT
Elongation factor Tu {ECO:0000313|EMBL:CDB89459.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp
04302015_12_scaffold_3258_2
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(225..2306)
DNA (2082bp) protein (694aa)
Elongation factor G n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHD8_BRESC rbh
translation elongation factor G; K02355 elongation factor G rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobactera
04302015_12_scaffold_3258_3
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2453..2926)
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHD7_BRESC rbh
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimon
04302015_12_scaffold_3258_4
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2996..3370)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AQB4_9CAUL
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Bre
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
04302015_12_scaffold_3258_5
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3823..4383)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QHD5_BRESC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADL01101.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" sourc
04302015_12_scaffold_3258_6
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4513..4632
DNA (120bp) protein (40aa)
Ribosomal protein L33 n=2 Tax=Brevundimonas diminuta RepID=L1QKX0_BREDI
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
04302015_12_scaffold_3258_7
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4708..5604)
DNA (897bp) protein (299aa)
UPI0003CFB7D3 related cluster n=1 Tax=unknown RepID=UPI0003CFB7D3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ87846.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
hypothetical protein
04302015_12_scaffold_3258_8
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5626..5928)
DNA (303bp) protein (101aa)
Conserved domain protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C383_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KEO96748.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
04302015_12_scaffold_3258_9
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6014..6892
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C384_HYPNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ53318.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringen
hypothetical protein rbh
04302015_12_scaffold_3258_10
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6889..7887
DNA (999bp) protein (333aa)
NADP-dependent oxidoreductase, L4BD family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C385_HYPNA
L4BD family NADP-dependent oxidoreductase {ECO:0000313|EMBL:KCZ98147.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
L4BD family NADP-dependent oxidoreductase
Displaying 10 items

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