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04302015_12_scaffold_1077

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1077_1
unknown

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comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

04302015_12_scaffold_1077_2
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(193..570)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037635DD
UPF0102 protein HJO_00215 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jo
hypothetical protein; K07460 putative endonuclease
04302015_12_scaffold_1077_3
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(560..1492)
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
tetrapyrrole methylase family protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C452_HYPNA rbh
04302015_12_scaffold_1077_4
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1555..2853
DNA (1299bp) protein (433aa)
Extracellular ligand-binding receptor n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XIG9_HIRBI rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ACT60776.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.
04302015_12_scaffold_1077_5
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2995..4143)
DNA (1149bp) protein (383aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ACT60777.1}; EC=1.3.99.22 {ECO:0000313|EMBL:ACT60777.1};; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003613D22 rbh
04302015_12_scaffold_1077_6
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4154..4774)
DNA (621bp) protein (207aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XIH1_HIRBI
04302015_12_scaffold_1077_7
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4996..5547
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI000377D5D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT60779.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (stra
04302015_12_scaffold_1077_8
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5719..5976
DNA (258bp) protein (86aa)
Transcriptional regulator, XRE family n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XIH3_HIRBI
XRE family transcriptional regulator; K07727 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT60780.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia
04302015_12_scaffold_1077_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6115..7293
DNA (1179bp) protein (393aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Caulobacter sp. AP07 RepID=J2PIL0_9CAUL
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL27157.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;"
AraC family transcriptional regulator
04302015_12_scaffold_1077_10
unknown

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7467..7883
DNA (417bp) protein (139aa)

This feature has no annotations

04302015_12_scaffold_1077_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(8000..8671)
DNA (672bp) protein (224aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
NUDIX hydrolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0A5_9CHLR
NUDIX hydrolase {ECO:0000313|EMBL:EFH82245.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM
04302015_12_scaffold_1077_12
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8779..9576)
DNA (798bp) protein (266aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1605283 species="Bacteria; Proteobacter
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XWZ0_SORCE
hypothetical protein
Displaying 12 items

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