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04302015_12_scaffold_1624

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1624_1
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..1382)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00037F18A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58484.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_1624_2
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1391..2686)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0003759E49
Uncharacterized protein {ECO:0000313|EMBL:GAM98057.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
04302015_12_scaffold_1624_3
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2683..4236)
DNA (1554bp) protein (518aa)
cobalt chelatase large subunit (EC:6.6.1.2); K09883 cobaltochelatase CobT [EC:6.6.1.2]
Cobalt chelatase, pCobT subunit {ECO:0000313|EMBL:ACT58483.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ACT58483.1};; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodob
Cobalt chelatase, pCobT subunit n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPW6_HIRBI
04302015_12_scaffold_1624_4
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4604..5812)
DNA (1209bp) protein (403aa)
FAD-dependent oxidoreductase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BX45_HYPNA rbh
Oxidoreductase {ECO:0000313|EMBL:GAM98922.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
FAD-dependent oxidoreductase
04302015_12_scaffold_1624_5
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5949..6173
DNA (225bp) protein (75aa)
Putative lipoprotein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4G6_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:GAM99179.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
putative lipoprotein
04302015_12_scaffold_1624_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6248..6796)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCN4_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU50323.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
04302015_12_scaffold_1624_7
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6793..7470)
DNA (678bp) protein (226aa)
Carboxymethylenebutenolidase n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8GZU2_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:KCZ55771.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringen
dienelactone hydrolase
04302015_12_scaffold_1624_8
unknown

Not on your lists

comp(7507..7689)
DNA (183bp) protein (61aa)

This feature has no annotations

04302015_12_scaffold_1624_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7743..8273)
DNA (531bp) protein (177aa)
Acetyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0D7_AZOC5
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:BAF87243.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (
04302015_12_scaffold_1624_10
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..9253)
DNA (984bp) protein (328aa)
cobalt chelatase small subunit (EC:6.6.1.2); K09882 cobaltochelatase CobS [EC:6.6.1.2]
Cobalt chelatase, pCobS small subunit {ECO:0000313|EMBL:ACT58482.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ACT58482.1};; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hy
aerobic cobaltochelatase subunit CobS n=1 Tax=Hirschia maritima RepID=UPI00037360A9
04302015_12_scaffold_1624_11
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9453..9833
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002ED79C1
Glyoxalase {ECO:0000313|EMBL:GAM96427.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
glyoxalase family protein
04302015_12_scaffold_1624_12
unknown

Not on your lists

comp(9912..10394)
DNA (483bp) protein (161aa)

This feature has no annotations

04302015_12_scaffold_1624_13
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10430..11092)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036C2270
heat shock protein DnaJ domain-containing protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ACT58481.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschi
04302015_12_scaffold_1624_14
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11186..11434)
DNA (249bp) protein (83aa)
Dopa 45-dioxygenase n=1 Tax=Sphingomonas elodea RepID=UPI0002630FC8
Dopa 4,5-dioxygenase family protein {ECO:0000313|EMBL:CDG84969.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="
Dopa 45-dioxygenase
04302015_12_scaffold_1624_15
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11466..11729
DNA (264bp) protein (88aa)
Cell division protein BolA n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TCT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ63501.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantic
BolA family protein; K05527 BolA protein
04302015_12_scaffold_1624_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11939..12685)
DNA (747bp) protein (249aa)
DNA-binding protein with HTH domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJA5_9BRAD
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EIG59861.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyr
transcriptional regulator; K07782 LuxR family transcriptional regulator
04302015_12_scaffold_1624_17
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12772..13839)
DNA (1068bp) protein (356aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=582402 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Hirschia maritima RepID=UPI000382F161
04302015_12_scaffold_1624_18
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13919..14482)
DNA (564bp) protein (188aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1280949 species="Bacteria; Proteobacteria; Alphap
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
shikimate kinase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B61C26
04302015_12_scaffold_1624_19
unknown

Not on your lists

14672..14893
DNA (222bp) protein (74aa)

This feature has no annotations

04302015_12_scaffold_1624_20
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14877..16511
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003735976
Uncharacterized protein {ECO:0000313|EMBL:KCZ91719.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsoni
hypothetical protein
04302015_12_scaffold_1624_21
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16671..17588
DNA (918bp) protein (306aa)
Tyrosine recombinase XerC n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPI7_HIRBI rbh
integrase family protein; K04763 integrase/recombinase XerD rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica
04302015_12_scaffold_1624_22
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17928..19625)
DNA (1698bp) protein (566aa)
Amidohydrolase 3 n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AMB2_MARMM rbh
amidohydrolase 3; K07047 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
Displaying 22 items

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