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04302015_12_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_189_1
unknown

Not on your lists

2..76
DNA (75bp) protein (25aa)

This feature has no annotations

04302015_12_scaffold_189_2
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130..1416
DNA (1287bp) protein (429aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKX6_HIRBI rbh
MiaB-like tRNA modifying protein rbh
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ACT57805.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia balti
04302015_12_scaffold_189_3
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1413..2528
DNA (1116bp) protein (372aa)
Signal recognition particle receptor FtsY n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKX5_HIRBI rbh
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria;
04302015_12_scaffold_189_4
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..3401
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003619069
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT57803.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_189_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3398..4648)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AP13_MARMM
Uncharacterized protein {ECO:0000313|EMBL:KIF24814.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
04302015_12_scaffold_189_6
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4700..6142
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003682EE9 rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACT57802.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia b
04302015_12_scaffold_189_7
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6175..6834
DNA (660bp) protein (220aa)
Probable intracellular septation protein A n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKX2_HIRBI
Intracellular septation protein A; K06190 intracellular septation protein
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hypho
04302015_12_scaffold_189_8
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7029..7262)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS36620.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_
04302015_12_scaffold_189_9
Hyphomonas neptunium, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7273..7812)
DNA (540bp) protein (180aa)
Hydrolase, NUDIX family, NudH subfamily n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BWF1_HYPNA
NUDIX family NudH subfamily hydrolase
Hydrolase, NUDIX family, NudH subfamily {ECO:0000313|EMBL:ABI77472.1}; TaxID=228405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyph
04302015_12_scaffold_189_10
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7934..8569
DNA (636bp) protein (212aa)
Transcriptional regulator, MarR family n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKX1_HIRBI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACT57800.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschi
04302015_12_scaffold_189_11
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..9108)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036A1410
protein thiol/disulfide oxidoreductase DsbE; K02199 cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
Periplasmic protein thiol/disulphide oxidoreductase DsbE {ECO:0000313|EMBL:ACT57799.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomo
04302015_12_scaffold_189_12
unknown

Not on your lists

comp(9105..9254)
DNA (150bp) protein (50aa)

This feature has no annotations

04302015_12_scaffold_189_13
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9259..9972)
DNA (714bp) protein (238aa)
Heme exporter protein CcmC n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKW8_HIRBI
heme exporter protein CcmC; K02195 heme exporter protein C
Heme exporter protein CcmC {ECO:0000313|EMBL:ACT57797.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (s
04302015_12_scaffold_189_14
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10064..10729)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI000367C83E
heme exporter protein CcmB; K02194 heme exporter protein B
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="H
04302015_12_scaffold_189_15
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10726..11358)
DNA (633bp) protein (211aa)
heme exporter protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41]
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Fl
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003775FC7
04302015_12_scaffold_189_16
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11482..14160
DNA (2679bp) protein (893aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1245923 species="Bacteria; Cyanobacteria; Nost
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
aconitate hydratase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B62124 rbh
04302015_12_scaffold_189_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14249..14968
DNA (720bp) protein (240aa)
UPI0003CE1781 related cluster n=1 Tax=unknown RepID=UPI0003CE1781
Uncharacterized protein {ECO:0000313|EMBL:ESW77696.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
04302015_12_scaffold_189_18
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14984..16000)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036FE355
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT57792.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_189_19
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15997..17859)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00037CD582 rbh
ABC transporter rbh
ABC-type uncharacterized transport system involved in gliding motility auxiliary component protein {ECO:0000313|EMBL:ACT57791.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alp
04302015_12_scaffold_189_20
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17859..18641)
DNA (783bp) protein (261aa)
Cytochrome c-type biogenesis protein CcmB n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKW1_HIRBI rbh
cytochrome C biogenesis protein CcmB; K01992 ABC-2 type transport system permease protein rbh
Cytochrome c-type biogenesis protein CcmB {ECO:0000313|EMBL:ACT57790.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirs
04302015_12_scaffold_189_21
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18638..19369)
DNA (732bp) protein (244aa)
ABC transporter related n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XKW0_HIRBI
ABC transporter; K09687 antibiotic transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACT57789.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (stra
04302015_12_scaffold_189_22
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19827..20177
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PEP1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AJY45382.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytic
hypothetical protein
04302015_12_scaffold_189_23
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20324..21112)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI000381D58A rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ99769.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorp
hypothetical protein
04302015_12_scaffold_189_24
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21316..21897
DNA (582bp) protein (194aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1245923 species="B
hypothetical protein; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2''''-5'''' RNA ligase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A061B0
04302015_12_scaffold_189_25
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21907..22512)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003749085
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
04302015_12_scaffold_189_26
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22668..23495)
DNA (828bp) protein (276aa)
Peptidase M48 Ste24p n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XRR5_HIRBI
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACT60675.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain
04302015_12_scaffold_189_27
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23597..23869
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9ABW7_CAUCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK22090.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
04302015_12_scaffold_189_28
unknown

Not on your lists

23993..24397
DNA (405bp) protein (135aa)
hypothetical protein
04302015_12_scaffold_189_29
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24401..25375)
DNA (975bp) protein (325aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036690C9
Uncharacterized protein {ECO:0000313|EMBL:KJS26556.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c
04302015_12_scaffold_189_30
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25576..27243
DNA (1668bp) protein (556aa)
UPI0003CE0D23 related cluster n=1 Tax=unknown RepID=UPI0003CE0D23
potassium efflux transporter (ybaL); K03455 monovalent cation:H+ antiporter-2, CPA2 family
Sodium:proton antiporter {ECO:0000313|EMBL:ESY71202.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
Displaying items 1-30 of 60 in total

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