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04302015_12_scaffold_272

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_272_1
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224..1405
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XPW7_HIRBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58484.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_272_2
unknown

Not on your lists

comp(1473..1763)
DNA (291bp) protein (97aa)

This feature has no annotations

04302015_12_scaffold_272_3
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1819..2376
DNA (558bp) protein (186aa)
MarR family transcription regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7A1_9BURK
MarR family transcription regulator {ECO:0000313|EMBL:EHP41626.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupria
marR family transcriptional Regulator
04302015_12_scaffold_272_4
unknown

Not on your lists

comp(2484..2771)
DNA (288bp) protein (96aa)

This feature has no annotations

04302015_12_scaffold_272_5
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3002..3916
DNA (915bp) protein (305aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035CCE9D
Uncharacterized protein {ECO:0000313|EMBL:KCZ61090.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
04302015_12_scaffold_272_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3927..4451
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBM1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82878.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresc
hypothetical protein
04302015_12_scaffold_272_7
unknown

Not on your lists

4613..5848
DNA (1236bp) protein (412aa)

This feature has no annotations

04302015_12_scaffold_272_8
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5933..7174
DNA (1242bp) protein (414aa)
TetR family transcriptional regulator n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036B94FC
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACA17797.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source=
04302015_12_scaffold_272_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7183..8052)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VNB8_CAUST
hypothetical protein; K06966
Uncharacterized protein {ECO:0000313|EMBL:ADG11991.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
04302015_12_scaffold_272_10
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8130..8576)
DNA (447bp) protein (149aa)
cytosine deaminase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002F78654
cytosine deaminase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
04302015_12_scaffold_272_11
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8937..9125)
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=2655999 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=CG_Anaero_02
04302015_12_scaffold_272_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9232..12144)
DNA (2913bp) protein (971aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase I {ECO:0000313|EMBL:ABS61728.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABS61728.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.
DNA polymerase I n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP95_PARL1
04302015_12_scaffold_272_13
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12333..14525
DNA (2193bp) protein (731aa)
histidine kinase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B71E9F
Histidine kinase {ECO:0000313|EMBL:KDA04330.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89
histidine kinase
04302015_12_scaffold_272_14
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14706..16199
DNA (1494bp) protein (498aa)
protease Do (EC:3.4.21.108) rbh
Protease Do {ECO:0000313|EMBL:ACT58165.1}; EC=3.4.21.108 {ECO:0000313|EMBL:ACT58165.1};; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphom
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036FA1C5 rbh
04302015_12_scaffold_272_15
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16268..17137)
DNA (870bp) protein (290aa)
serB; phosphoserine phosphatase SerB (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] rbh
Phosphoserine phosphatase SerB n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C510_HYPNA rbh
Phosphoserine phosphatase {ECO:0000313|EMBL:KJS36535.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BR
04302015_12_scaffold_272_16
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17252..18184
DNA (933bp) protein (311aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Hirschia maritima RepID=UPI00036A2CD6 rbh
04302015_12_scaffold_272_17
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18202..19455)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI0003751C0C rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ93130.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschia
04302015_12_scaffold_272_18
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19828..21603
DNA (1776bp) protein (592aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
acetolactate synthase n=1 Tax=Hirschia maritima RepID=UPI000362FCA4 rbh
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ACT58169.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;
04302015_12_scaffold_272_19
unknown

Not on your lists

21606..22166
DNA (561bp) protein (187aa)

This feature has no annotations

04302015_12_scaffold_272_20
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22181..22732
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C513_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KEA63129.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacteri
hypothetical protein
04302015_12_scaffold_272_21
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22732..23322
DNA (591bp) protein (197aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase 3 regulatory subunit {ECO:0000313|EMBL:KDA00120.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KDA00120.1};; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacteral
Acetolactate synthase, small subunit n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C514_HYPNA
04302015_12_scaffold_272_22
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23467..23835
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM97476.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
04302015_12_scaffold_272_23
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23916..24935
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] rbh
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XN02_HIRBI rbh
04302015_12_scaffold_272_24

Not on your lists

25011..25592
DNA (582bp) protein (194aa)
Acetyltransferase (GNAT) domain n=1 Tax=uncultured organism RepID=T1W9W2_9ZZZZ
Acetyltransferase (GNAT) domain {ECO:0000313|EMBL:AGU11573.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
GCN5-like N-acetyltransferase
04302015_12_scaffold_272_25
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25634..26260
DNA (627bp) protein (209aa)
Rhomboid family protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XN07_HIRBI
S54 family peptidase {ECO:0000313|EMBL:KCZ93901.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii M
rhomboid family protein
Displaying 25 items

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