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04302015_12_scaffold_353

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_353_1
Hyphomonas sp. L-53-1-40, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1170
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B3B0BC rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ65881.1}; TaxID=1207058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. L-53
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
04302015_12_scaffold_353_2
unknown

Not on your lists

1172..1867
DNA (696bp) protein (232aa)

This feature has no annotations

04302015_12_scaffold_353_3
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1864..4086)
DNA (2223bp) protein (741aa)
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase (EC:1.1.1.35 4.2.1.17 5.1.2.3); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA e
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B38531 rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ60817.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas
04302015_12_scaffold_353_4
unknown

Not on your lists

comp(4088..4336)
DNA (249bp) protein (83aa)

This feature has no annotations

04302015_12_scaffold_353_5
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4338..5543)
DNA (1206bp) protein (402aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KCZ83077.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KCZ83077.1};; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonad
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B3F5F1 rbh
04302015_12_scaffold_353_6
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5590..7374)
DNA (1785bp) protein (595aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4E6_HYPNA rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KCZ52860.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2
acyl-CoA dehydrogenase family protein
04302015_12_scaffold_353_7
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7504..7962)
DNA (459bp) protein (153aa)
transcriptional regulator n=1 Tax=Ponticaulis koreensis RepID=UPI0003B69EA0
MerR family transcriptional regulator {ECO:0000313|EMBL:KCZ90805.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho
MerR family transcriptional regulator
04302015_12_scaffold_353_8
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8209..11781
DNA (3573bp) protein (1191aa)
hypothetical protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4D1F1 rbh
Putative localization factor protein PodJ {ECO:0000313|EMBL:KCZ90804.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="H
putative localization factor protein PodJ; K13582 localization factor PodJL
04302015_12_scaffold_353_9
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..12729
DNA (909bp) protein (303aa)
permease n=1 Tax=Hirschia maritima RepID=UPI000370665E
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ACT58620.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (stra
04302015_12_scaffold_353_10
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12726..13481
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI000368CA70
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58619.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_353_11
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13483..14307)
DNA (825bp) protein (275aa)
Conserved domain protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C4K5_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ90711.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsoni
hypothetical protein
04302015_12_scaffold_353_12
unknown

Not on your lists

14363..14647
DNA (285bp) protein (95aa)

This feature has no annotations

04302015_12_scaffold_353_13
unknown

Not on your lists

14747..15055
DNA (309bp) protein (103aa)

This feature has no annotations

04302015_12_scaffold_353_14
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15052..17535)
DNA (2484bp) protein (828aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
helicase n=1 Tax=Ponticaulis koreensis RepID=UPI0003B6B3BF rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KCZ85509.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens
04302015_12_scaffold_353_15
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17663..18430
DNA (768bp) protein (256aa)
carbonate dehydratase (EC:4.2.1.1); K01674 carbonic anhydrase [EC:4.2.1.1]
Carbonate dehydratase {ECO:0000313|EMBL:ACT58615.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ACT58615.1};; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00036AEAD4
04302015_12_scaffold_353_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18498..18908)
DNA (411bp) protein (137aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_12_scaffold_353_17
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18905..19564)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000375F801
AMP-ligase {ECO:0000313|EMBL:EAP77227.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
AMP-dependent synthetase and ligase
04302015_12_scaffold_353_18
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20255..21094)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003797383
Uncharacterized protein {ECO:0000313|EMBL:EAP77228.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
04302015_12_scaffold_353_19
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21091..22440)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003717EC2
Cytidylyltransferase family protein {ECO:0000313|EMBL:KHQ53578.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponti
phosphatidate cytidylyltransferase
04302015_12_scaffold_353_20
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22437..23549)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SIP9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO57190.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase-like protein; K13622 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
04302015_12_scaffold_353_21
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23552..26185)
DNA (2634bp) protein (878aa)
pyruvate phosphate dikinase PEP/pyruvate-binding protein; K01007 pyruvate, water dikinase [EC:2.7.9.2] rbh
Pyruvate phosphate dikinase, PEP/pyruvate binding domain protein id=4568221 bin=GWC2_Geobacteraceae_55_20 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
Tax=GWC2_Geobacteraceae_55_20_curated
04302015_12_scaffold_353_22
Asticcacaulis sp. AC402, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26182..27141)
DNA (960bp) protein (320aa)
ubia prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4Q8D5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ75498.1}; TaxID=1282361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
04302015_12_scaffold_353_23
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27138..28424)
DNA (1287bp) protein (429aa)
Hydroxymethylglutaryl-CoA reductase {ECO:0000313|EMBL:AJQ97133.1}; EC=1.1.1.34 {ECO:0000313|EMBL:AJQ97133.1};; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
3-hydroxy-3-methylglutaryl-CoA reductase; K00021 hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] rbh
Hydroxymethylglutaryl-coenzyme A reductase id=2455596 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
04302015_12_scaffold_353_24
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28592..29356)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B44673
putative outer membrane protein; K03098 outer membrane lipoprotein Blc
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 24 items

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