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04302015_12_scaffold_923

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_923_1
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(423..1052)
DNA (630bp) protein (210aa)
chemotaxis protein n=1 Tax=Hirschia maritima RepID=UPI00036F8750
chemotaxis phosphatase, CheZ; K03414 chemotaxis protein CheZ
Putative chemotaxis phosphatase, CheZ {ECO:0000313|EMBL:ACT58672.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia
04302015_12_scaffold_923_2
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1052..1438)
DNA (387bp) protein (129aa)
chemotaxis protein CheY n=1 Tax=Ponticaulis koreensis RepID=UPI0003B54A63
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
Response regulator receiver protein {ECO:0000313|EMBL:ABI64903.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaul
04302015_12_scaffold_923_3
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1671..2099
DNA (429bp) protein (143aa)
MaoC family dehydratase n=1 Tax=Hirschia maritima RepID=UPI000366935A
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ACT58674.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia balti
04302015_12_scaffold_923_4
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2104..3012
DNA (909bp) protein (303aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1280953 species="Bacteria; Proteobacte
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein RibF n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C3X2_HYPNA rbh
04302015_12_scaffold_923_5
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3165..6143
DNA (2979bp) protein (993aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XQS0_HIRBI rbh
04302015_12_scaffold_923_6
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6146..6718
DNA (573bp) protein (191aa)
peptidase A8 signal peptidase II; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00035D5B2F
04302015_12_scaffold_923_7
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6763..7275
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00037B4A04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58678.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir
04302015_12_scaffold_923_8
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7272..8627
DNA (1356bp) protein (452aa)
peptidase, M16 family (EC:3.4.24.-)
zinc protease n=1 Tax=Ponticaulis koreensis RepID=UPI0003B309F0
Insulinase family protein {ECO:0000313|EMBL:KCZ88130.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas jannas
04302015_12_scaffold_923_9
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8624..9973
DNA (1350bp) protein (450aa)
M16 family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-]
zinc protease n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4FF27 rbh
M16 family peptidase {ECO:0000313|EMBL:KCZ89417.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii M
04302015_12_scaffold_923_10
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10058..10687
DNA (630bp) protein (210aa)
DNA mismatch repair protein MutL n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XQS3_HIRBI
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae
Displaying 10 items

View Taxonomy
NameRatio
Hirschia baltica
60.00%
Maricaulis maris
10.00%
Hyphomonas oceanitis
10.00%
Hyphomonas johnsonii
10.00%
Hyphomonas jannaschiana
10.00%
Hirschia baltica: 0.6Hyphomonas jannaschiana: 0.1Hyphomonas johnsonii: 0.1Hyphomonas oceanitis: 0.1Maricaulis maris: 0.1Hirschia balticaHyphomonas jannaschianaHyphomonas johnsoniiHyphomonas oceanitisMaricaulis maris