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04302015_12_scaffold_1240

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1240_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..663)
DNA (663bp) protein (221aa)
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IFM5_AZOC5
04302015_12_scaffold_1240_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(679..1383)
DNA (705bp) protein (235aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEQ7_XANP2
6-phosphogluconolactonase {ECO:0000313|EMBL:ABS66500.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotr
04302015_12_scaffold_1240_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1380..2852)
DNA (1473bp) protein (491aa)
glucose-6-phosphate dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IFL9_AZOC5
04302015_12_scaffold_1240_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3185..3412)
DNA (228bp) protein (76aa)
30S ribosomal protein S21 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IFL5_AZOC5
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhiz
04302015_12_scaffold_1240_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3566..4204)
DNA (639bp) protein (213aa)
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=KCY_XANP2
04302015_12_scaffold_1240_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4204..5571)
DNA (1368bp) protein (456aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IKN4_AZOC5 rbh
04302015_12_scaffold_1240_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5728..6126
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IKN1_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89928.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
04302015_12_scaffold_1240_trna_1
unknown

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6237..6309
DNA (73bp)
transferRNA
04302015_12_scaffold_1240_trna_2
unknown

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6456..6528
DNA (73bp)
transferRNA
04302015_12_scaffold_1240_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6733..7443
DNA (711bp) protein (237aa)
Outer membrane protein, 31 kDa n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IKX6_AZOC5
outer membrane protein, 31 kDa
Outer membrane protein, 31 kDa {ECO:0000313|EMBL:BAF89960.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
04302015_12_scaffold_1240_9
Methylosinus sp. B4S, Methylosinus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7636..7905)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QLA3_METTR
Uncharacterized protein {ECO:0000313|EMBL:BAN84086.1}; TaxID=1117991 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylosinus.;" source="Methylosinus sp. B4S
Stress-induced protein
04302015_12_scaffold_1240_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8128..9801
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IES2_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89526.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
04302015_12_scaffold_1240_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9914..10228)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A053_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89314.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Stark
04302015_12_scaffold_1240_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10326..10559)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IER3_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89523.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
04302015_12_scaffold_1240_13
bacterium YEK0313, Bacteria

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10931..12211
DNA (1281bp) protein (427aa)
Type I secretion adaptor protein (HlyD family) n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRX8_GRABC rbh
Putative efflux pump membrane fusion protein {ECO:0000313|EMBL:CEJ14745.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
type I secretion adaptor protein rbh
04302015_12_scaffold_1240_14
bacterium YEK0313, Bacteria

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12220..14439
DNA (2220bp) protein (740aa)
Type I protein secretion ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRX7_GRABC rbh
Lactococcin-G-processing and transport ATP-binding protein LagD {ECO:0000313|EMBL:CEJ14746.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
type I protein secretion ATP-binding protein rbh
04302015_12_scaffold_1240_15
bacterium YEK0313, Bacteria

Not on your lists

14429..17275
DNA (2847bp) protein (949aa)
ABC-type multidrug/protein/lipid transport system, ATPase component n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRX6_GRABC rbh
Alpha-hemolysin translocation ATP-binding protein HlyB {ECO:0000313|EMBL:CEJ14747.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC-type multidrug/protein/lipid transport system, ATPase component rbh
04302015_12_scaffold_1240_16
bacterium YEK0313, Bacteria

Not on your lists

17336..18010
DNA (675bp) protein (225aa)
Two component transcriptional regulatory protein, winged-helix family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WQY8_9BRAD
Transcriptional regulatory protein BasR {ECO:0000313|EMBL:CEJ14748.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
two component transcriptional regulator
04302015_12_scaffold_1240_17
bacterium YEK0313, Bacteria

Not on your lists

18007..18489
DNA (483bp) protein (161aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 19 items

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