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04302015_12_scaffold_577

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_577_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VMG2_RHILT
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJC74516.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
hypothetical protein
04302015_12_scaffold_577_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

759..1478
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NAS3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27682.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator ArsR family
04302015_12_scaffold_577_3
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1598..2974
DNA (1377bp) protein (459aa)
Uncharacterized protein {ECO:0000313|EMBL:KHA78873.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
04302015_12_scaffold_577_4
bacterium YEK0313, Bacteria

Not on your lists

comp(2985..3719)
DNA (735bp) protein (245aa)
GntR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YBN4_9BURK
HTH-type transcriptional repressor CsiR {ECO:0000313|EMBL:CEJ10265.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator, GntR family
04302015_12_scaffold_577_5
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

4239..4922
DNA (684bp) protein (228aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.-)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037576C3
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
04302015_12_scaffold_577_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4952..5842
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LL05_9RHOB rbh
polysaccharide deacetylase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5941..6837
DNA (897bp) protein (299aa)
chitooligosaccharide deacetylase (EC:3.5.1.-) rbh
Chitooligosaccharide deacetylase n=2 Tax=Burkholderiaceae RepID=Q0K447_CUPNH rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6834..7694
DNA (861bp) protein (287aa)
Inner-membrane translocator id=2355477 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7691..8659
DNA (969bp) protein (323aa)
ABC-type transporter, integral membrane subunit id=4547723 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 2, HAAT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8697..9953
DNA (1257bp) protein (419aa)
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_11
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

10027..10782
DNA (756bp) protein (252aa)
UPI0003CF394F related cluster n=1 Tax=unknown RepID=UPI0003CF394F
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
04302015_12_scaffold_577_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10775..11479
DNA (705bp) protein (235aa)
ABC transporter related id=2654110 bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_12_scaffold_577_13
unknown

Not on your lists

11481..11672
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_12_scaffold_577_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11669..13084
DNA (1416bp) protein (472aa)
glutamyl-tRNA(Gln) amidotransferase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Putative glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPZ4_AZOC5
Putative glutamyl-tRNA(Gln) amidotransferase {ECO:0000313|EMBL:BAF86719.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source=
04302015_12_scaffold_577_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13208..14500
DNA (1293bp) protein (431aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
fad dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
D-amino acid dehydrogenase small subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYF7_VARPE rbh
04302015_12_scaffold_577_16
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14669..16183)
DNA (1515bp) protein (505aa)
amino acid ABC transporter permease n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B6104A rbh
Gln/Arg/Lys/His-binding protein and permease rbh
Gln/Arg/Lys/His-binding protein and permease protein {ECO:0000313|EMBL:ABI61775.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibact
04302015_12_scaffold_577_17
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16213..16965)
DNA (753bp) protein (251aa)
Gln/Arg/Lys/His transport ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTS8_GRABC rbh
Gln/Arg/Lys/His transport ATP-binding protein rbh
Gln/Arg/Lys/His transport ATP-binding protein {ECO:0000313|EMBL:AHJ62700.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;"
04302015_12_scaffold_577_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17093..18271)
DNA (1179bp) protein (393aa)
Transmembrane efflux protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJC5_AZOC5
transmembrane efflux protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Transmembrane efflux protein {ECO:0000313|EMBL:BAF86282.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium ca
04302015_12_scaffold_577_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18410..19306
DNA (897bp) protein (299aa)
Putative transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJC3_AZOC5 rbh
transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:BAF86281.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizob
Displaying 19 items

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