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04302015_12_scaffold_704

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_704_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..536)
DNA (534bp) protein (178aa)
Extensin-like protein C-terminus n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I4G1_AZOC5
extensin-like protein C-terminus
Extensin-like protein C-terminus {ECO:0000313|EMBL:BAF87725.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobiu
04302015_12_scaffold_704_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

790..1812
DNA (1023bp) protein (341aa)
Regulatory protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQG8_AZOC5 rbh
lacI; regulatory protein rbh
Regulatory protein {ECO:0000313|EMBL:BAF86779.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
04302015_12_scaffold_704_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1911..2933
DNA (1023bp) protein (341aa)
Putative periplasmic solute-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQH1_AZOC5
substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
Putative periplasmic solute-binding protein {ECO:0000313|EMBL:BAF86780.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="
04302015_12_scaffold_704_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2992..3810
DNA (819bp) protein (273aa)
Putative permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQH4_AZOC5 rbh
permease; K02053 putative spermidine/putrescine transport system permease protein rbh
Putative permease protein {ECO:0000313|EMBL:BAF86781.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium cauli
04302015_12_scaffold_704_5
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3816..4622
DNA (807bp) protein (269aa)
Putative permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQH6_AZOC5 rbh
permease; K02053 putative spermidine/putrescine transport system permease protein rbh
Putative permease protein {ECO:0000313|EMBL:BAF86782.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium cauli
04302015_12_scaffold_704_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4619..5524
DNA (906bp) protein (302aa)
Putative ABC transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IQH9_AZOC5
ABC transporter; K02052 putative spermidine/putrescine transport system ATP-binding protein
Putative ABC transporter {ECO:0000313|EMBL:BAF86783.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulin
04302015_12_scaffold_704_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5530..6354
DNA (825bp) protein (275aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH99_XANP2 rbh
metallophosphoesterase rbh
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase
04302015_12_scaffold_704_8
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6476..6784
DNA (309bp) protein (103aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AIQ92521.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AIQ92521.1};; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylob
NmrA family transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034DD899
NAD-dependent epimerase/dehydratase
04302015_12_scaffold_704_9
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6799..7182
DNA (384bp) protein (128aa)
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AIQ92521.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AIQ92521.1};; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylob
NmrA family transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034DD899
NAD-dependent epimerase/dehydratase
04302015_12_scaffold_704_10
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7289..8176
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034D81B4 rbh
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AIQ92519.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
04302015_12_scaffold_704_11
bacterium YEK0313, Bacteria

Not on your lists

comp(8242..9321)
DNA (1080bp) protein (360aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6); K00005 glycerol dehydrogenase [EC:1.1.1.6] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG80_9BRAD rbh
Glycerol dehydrogenase {ECO:0000313|EMBL:CEJ13734.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
04302015_12_scaffold_704_12
bacterium YEK0313, Bacteria

Not on your lists

comp(9318..10094)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSG8_9BRAD rbh
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CEJ13735.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
04302015_12_scaffold_704_13
bacterium YEK0313, Bacteria

Not on your lists

comp(10225..11064)
DNA (840bp) protein (280aa)
Maltose/maltodextrin ABC transporter, permease protein n=2 Tax=Bradyrhizobiaceae RepID=F7QKE3_9BRAD rbh
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:CEJ13736.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
04302015_12_scaffold_704_14
bacterium YEK0313, Bacteria

Not on your lists

comp(11071..11931)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLI9_9BRAD rbh
Inner membrane ABC transporter permease protein YcjO {ECO:0000313|EMBL:CEJ13737.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
04302015_12_scaffold_704_15
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12082..13410)
DNA (1329bp) protein (443aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKE1_9BRAD rbh
ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:EGP08310.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bra
extracellular solute-binding protein rbh
04302015_12_scaffold_704_16
bacterium YEK0313, Bacteria

Not on your lists

comp(13493..14587)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLL0_9BRAD rbh
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:CEJ13739.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter-like protein
04302015_12_scaffold_704_17
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14624..16138)
DNA (1515bp) protein (505aa)
carbohydrate kinase; K00854 xylulokinase [EC:2.7.1.17] rbh
Xylulokinase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSG2_9BRAD rbh
Xylulokinase {ECO:0000313|EMBL:EKS42475.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
04302015_12_scaffold_704_18
bacterium YEK0313, Bacteria

Not on your lists

comp(16174..17667)
DNA (1494bp) protein (498aa)
FAD linked oxidase domain-containing protein; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] rbh
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PQ44_9BRAD rbh
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:CEJ13741.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
04302015_12_scaffold_704_19
bacterium YEK0313, Bacteria

Not on your lists

comp(17803..18807)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLI5_9BRAD rbh
Catabolite control protein A {ECO:0000313|EMBL:CEJ13742.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
periplasmic-binding protein/LacI transcriptional regulator
04302015_12_scaffold_704_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18923..19789)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NQ51_9BORD
extra-cytoplasmic solute receptor family protein 40
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 20 items

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