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04302015_12_scaffold_945

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_945_1
unknown

Not on your lists

1..72
DNA (72bp) protein (24aa)

This feature has no annotations

04302015_12_scaffold_945_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104..685
DNA (582bp) protein (194aa)
pyroglutamyl peptidase I; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacterac
Pyroglutamyl peptidase I n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXS5_AZOC5
04302015_12_scaffold_945_trna_1
unknown

Not on your lists

797..880
DNA (84bp)
transferRNA
04302015_12_scaffold_945_3
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1145..1660
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FC4181
cytochrome B561; K12262 cytochrome b561
Cytochrome B561 {ECO:0000313|EMBL:ERJ39919.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" sou
04302015_12_scaffold_945_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1817..2479
DNA (663bp) protein (221aa)
Nitrile hydratase, alpha subunit {ECO:0000313|EMBL:EFH12352.1}; EC=4.2.1.84 {ECO:0000313|EMBL:EFH12352.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Aceto
nitrile hydratase subunit alpha (EC:4.2.1.84); K01721 nitrile hydratase [EC:4.2.1.84]
cobalt-containing nitrile hydratase subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F8A44D rbh
04302015_12_scaffold_945_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2476..3138
DNA (663bp) protein (221aa)
Nitrile hydratase, beta subunit {ECO:0000313|EMBL:EFH12351.1}; EC=4.2.1.84 {ECO:0000313|EMBL:EFH12351.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetob
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D7AD19
nthB; nitrile hydratase, subunit beta
04302015_12_scaffold_945_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3122..3484
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SMM5_9BRAD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU44283.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
04302015_12_scaffold_945_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4180)
DNA (681bp) protein (227aa)
Putative acyl-CoA transferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICZ7_AZOC5 rbh
acyl-CoA transferase rbh
Putative acyl-CoA transferase {ECO:0000313|EMBL:BAF88862.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium c
04302015_12_scaffold_945_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4270..4452)
DNA (183bp) protein (61aa)
Putative acyl-CoA transferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICZ7_AZOC5
acyl-CoA transferase
Putative acyl-CoA transferase {ECO:0000313|EMBL:BAF88862.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium c
04302015_12_scaffold_945_9
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4465..5274)
DNA (810bp) protein (270aa)
Transcriptional regulator n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID01_AZOC5 rbh
iclR; transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAF88863.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium cauli
04302015_12_scaffold_945_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5330..6076)
DNA (747bp) protein (249aa)
Enoyl-CoA hydratase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID04_AZOC5 rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAF88864.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
04302015_12_scaffold_945_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6073..7074)
DNA (1002bp) protein (334aa)
npd; 2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
2-nitropropane dioxygenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID05_AZOC5 rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:BAF88865.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caul
04302015_12_scaffold_945_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7071..7781)
DNA (711bp) protein (237aa)
ABC-type branched-chain amino acid transport ATPase component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID09_AZOC5 rbh
branched-chain amino acid ABC transporter ATPase rbh
ABC-type branched-chain amino acid transport ATPase component {ECO:0000313|EMBL:BAF88866.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhi
04302015_12_scaffold_945_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7774..8484)
DNA (711bp) protein (237aa)
ABC-type branched-chain amino acid transport ATPase component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID11_AZOC5 rbh
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein rbh
ABC-type branched-chain amino acid transport ATPase component {ECO:0000313|EMBL:BAF88867.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhi
04302015_12_scaffold_945_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8471..9463)
DNA (993bp) protein (331aa)
ABC-type branched-chain amino acid transport permease component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID14_AZOC5 rbh
branched-chain amino acid ABC transporter permease rbh
ABC-type branched-chain amino acid transport permease component {ECO:0000313|EMBL:BAF88868.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azor
04302015_12_scaffold_945_15
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9474..10346)
DNA (873bp) protein (291aa)
ABC-type branched-chain amino acid transport permease component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID16_AZOC5 rbh
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
ABC-type branched-chain amino acid transport permease component {ECO:0000313|EMBL:BAF88869.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azor
04302015_12_scaffold_945_16
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10504..11676)
DNA (1173bp) protein (391aa)
ABC-type branched-chain amino acid transport periplasmic component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID18_AZOC5 rbh
branched chain amino acid ABC transporter substrate-binding protein rbh
ABC-type branched-chain amino acid transport periplasmic component {ECO:0000313|EMBL:BAF88870.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; A
04302015_12_scaffold_945_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12043..14121
DNA (2079bp) protein (693aa)
enoyl-CoA hydratase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] rbh
Enoyl-CoA hydratase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID21_AZOC5 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAF88871.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
04302015_12_scaffold_945_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14785..15555
DNA (771bp) protein (257aa)
AMP-dependent synthetase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID23_AZOC5 rbh
AMP-dependent synthetase {ECO:0000313|EMBL:BAF88872.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulin
04302015_12_scaffold_945_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15579..16766
DNA (1188bp) protein (396aa)
thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Thiolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID26_AZOC5 rbh
Thiolase {ECO:0000313|EMBL:BAF88873.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain AT
04302015_12_scaffold_945_20
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16770..17966
DNA (1197bp) protein (399aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID29_AZOC5 rbh
acyl-CoA dehydrogenase rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAF88874.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
04302015_12_scaffold_945_21
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17989..19143
DNA (1155bp) protein (385aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ID33_AZOC5 rbh
acyl-CoA dehydrogenase rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAF88875.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
04302015_12_scaffold_945_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19225..19635
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYQ8_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI73537.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
04302015_12_scaffold_945_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19722..20354
DNA (633bp) protein (211aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VN40_RHOPX
lysine exporter protein LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ADU42357.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhod
04302015_12_scaffold_945_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20513..20992
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3J5_9RHIZ
50S ribosomal protein L21 {ECO:0000313|EMBL:KEA04043.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
hypothetical protein; K09958 hypothetical protein
04302015_12_scaffold_945_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20996..21574
DNA (579bp) protein (193aa)
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD82_AGRRK
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:ACM28211.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobact
04302015_12_scaffold_945_26
unknown

Not on your lists

comp(21626..22030)
DNA (405bp) protein (135aa)

This feature has no annotations

04302015_12_scaffold_945_27
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22212..22487)
DNA (276bp) protein (92aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M891_METRJ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:GAN51133.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacter
Displaying 28 items

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