ggKbase home page

04302015_12_scaffold_2165

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_2165_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..186
DNA (186bp) protein (62aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Renal dipeptidase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IA36_AZOC5
Renal dipeptidase {ECO:0000313|EMBL:BAF88457.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (
04302015_12_scaffold_2165_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217..744
DNA (528bp) protein (176aa)
4-vinyl reductase 4VR n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM0_XANP2 rbh
4-vinyl reductase 4VR rbh
4-vinyl reductase 4VR {ECO:0000313|EMBL:ABS66113.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophi
04302015_12_scaffold_2165_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

816..1883
DNA (1068bp) protein (356aa)
Extracellular solute-binding protein family 1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM1_XANP2 rbh
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS66114.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xant
04302015_12_scaffold_2165_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1906..2817
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM2_XANP2 rbh
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS66115.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae;
04302015_12_scaffold_2165_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2817..3515
DNA (699bp) protein (233aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM3_XANP2 rbh
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS66116.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae;
04302015_12_scaffold_2165_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3602..4141)
DNA (540bp) protein (180aa)
sarcosine oxidase gamma subunit; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Sarcosine oxidase gamma subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM4_XANP2
Sarcosine oxidase gamma subunit {ECO:0000313|EMBL:ABS66117.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter
04302015_12_scaffold_2165_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4134..4607)
DNA (474bp) protein (158aa)
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase alpha subunit n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HRD6_AZOC5
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:BAF87168.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium
04302015_12_scaffold_2165_8
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5015..7270
DNA (2256bp) protein (752aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB51290.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
04302015_12_scaffold_2165_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7176..7469)
DNA (294bp) protein (98aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1]
Sarcosine oxidase, delta subunit family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM6_XANP2
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:ABS66119.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanth
04302015_12_scaffold_2165_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..8732)
DNA (1254bp) protein (418aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] rbh
Sarcosine oxidase, beta subunit family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM7_XANP2 rbh
Sarcosine oxidase, beta subunit family {ECO:0000313|EMBL:ABS66120.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
04302015_12_scaffold_2165_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8836..10110)
DNA (1275bp) protein (425aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM8_XANP2 rbh
04302015_12_scaffold_2165_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10157..10741)
DNA (585bp) protein (195aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase 1 {ECO:0000313|EMBL:ABS66122.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ABS66122.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xa
L-serine dehydratase 1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM9_XANP2
04302015_12_scaffold_2165_13
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10708..11361)
DNA (654bp) protein (218aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase 1 {ECO:0000313|EMBL:ABS66122.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ABS66122.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xa
L-serine dehydratase 1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDM9_XANP2
04302015_12_scaffold_2165_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11390..12445
DNA (1056bp) protein (352aa)
Transcriptional regulator, AraC family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDN0_XANP2 rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABS66123.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
04302015_12_scaffold_2165_15
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12505..12963)
DNA (459bp) protein (153aa)
YjgF family protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IB48_AZOC5
yjgF family protein
YjgF family protein {ECO:0000313|EMBL:BAF88607.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans
04302015_12_scaffold_2165_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13014..13700)
DNA (687bp) protein (229aa)
Fis family transcriptional regulator n=1 Tax=Xanthobacteraceae RepID=UPI00037A8372 rbh
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADH88855.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkey
04302015_12_scaffold_2165_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13697..13954)
DNA (258bp) protein (86aa)
osmosensitive K channel His kinase sensor; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Sta
histidine kinase n=1 Tax=Xanthobacteraceae RepID=UPI00035E0BC5
Displaying 17 items

View Taxonomy