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04302015_12_scaffold_1549

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1549_1
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1028)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PQH2_RHOS1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABN78588.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
04302015_12_scaffold_1549_2
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1025..1582)
DNA (558bp) protein (186aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
ATP-dependent protease subunit HslV {ECO:0000255|HAMAP-Rule:MF_00248}; EC=3.4.25.2 {ECO:0000255|HAMAP-Rule:MF_00248};; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
ATP-dependent protease subunit HslV n=2 Tax=Rhodobacter sphaeroides RepID=HSLV_RHOS4 rbh
04302015_12_scaffold_1549_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1714..1983)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKG9_9RHOB
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
04302015_12_scaffold_1549_4
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2275..3282
DNA (1008bp) protein (336aa)
type I secretion protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B33A26
type I secretion target repeat-containing protein
Tax=CG_Rhodob_01
04302015_12_scaffold_1549_5
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3286..3786)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXF6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGB81018.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
04302015_12_scaffold_1549_6
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..4869
DNA (717bp) protein (239aa)
Rmt2 protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGP8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AHM03814.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium
hypothetical protein
04302015_12_scaffold_1549_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4930..6012
DNA (1083bp) protein (361aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] rbh
Phenylalanine--tRNA ligase alpha subunit id=2448296 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
04302015_12_scaffold_1549_8
unknown

Not on your lists

6029..6469
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5288F
04302015_12_scaffold_1549_9
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..7461)
DNA (996bp) protein (332aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KFP1_9RHOB rbh
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EKX59295.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobac
hypothetical protein; K07007 rbh
04302015_12_scaffold_1549_10
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7785..9290
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPJ3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW61910.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein rbh
04302015_12_scaffold_1549_11
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9740..10624
DNA (885bp) protein (295aa)
Modulator protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENS9_9RHOB
Modulator protein {ECO:0000313|EMBL:ESW61909.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14
C69 family peptidase; K03592 PmbA protein
04302015_12_scaffold_1549_12
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11474..12361
DNA (888bp) protein (296aa)
Thiamin ABC transporter, substrate-binding component n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KCE0_9RHOB rbh
Thiamin ABC transporter, substrate-binding component {ECO:0000313|EMBL:EKX58466.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter
tbpA; thiamine transporter substrate binding subunit; K02064 thiamine transport system substrate-binding protein
04302015_12_scaffold_1549_13
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..13802
DNA (1413bp) protein (471aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WWC2_RHOS5 rbh
thiP, sfuB; thiamine transporter membrane protein; K02063 thiamine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABP71686.1}; Flags: Precursor;; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
04302015_12_scaffold_1549_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..14082
DNA (294bp) protein (98aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WWC3_RHOS5
ABC transporter-like protein; K02062 thiamine transport system ATP-binding protein
04302015_12_scaffold_1549_15
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14124..14627
DNA (504bp) protein (168aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PFR4_RHOS1
ABC transporter; K02062 thiamine transport system ATP-binding protein
04302015_12_scaffold_1549_16
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14679..15473)
DNA (795bp) protein (265aa)
Cytochrome c1 id=2865703 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
04302015_12_scaffold_1549_17
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15488..16825)
DNA (1338bp) protein (446aa)
Cytochrome b n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SIH4_9RHOB rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.
cytochrome b/b6-like protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
04302015_12_scaffold_1549_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16835..17407)
DNA (573bp) protein (191aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria;
ubiquinol-cytochrome c reductase, iron-sulfur subunit; K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
UPI0003D6B385 related cluster n=1 Tax=unknown RepID=UPI0003D6B385 rbh
04302015_12_scaffold_1549_19
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17582..18187)
DNA (606bp) protein (202aa)
Glutathione S-transferase {ECO:0000313|EMBL:KDB03030.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas
Glutathione S-transferase domain protein id=2865679 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
glutathione S-transferase-like protein
04302015_12_scaffold_1549_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18258..18884)
DNA (627bp) protein (209aa)
Negative transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG84_9RHOB
negative transcriptional regulator; K07734 transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_1549_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19039..19164)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJH7_9RHOB
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_1549_trna_1
unknown

Not on your lists

comp(19242..19313)
DNA (72bp)
transferRNA
04302015_12_scaffold_1549_22
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19491..20354
DNA (864bp) protein (288aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIR5_9RHOB rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ESW60119.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobac
N-formylglutamate amidohydrolase rbh
04302015_12_scaffold_1549_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20388..21359)
DNA (972bp) protein (324aa)
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV id=2865659 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 24 items

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