ggKbase home page

04302015_12_scaffold_508

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_508_1
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..568
DNA (567bp) protein (189aa)
gene transfer agent (GTA) n=1 Tax=Paracoccus sp. N5 RepID=UPI000381CD1C
Gene transfer agent (GTA) {ECO:0000313|EMBL:KGJ23460.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5
hypothetical protein
04302015_12_scaffold_508_2
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

586..2244
DNA (1659bp) protein (553aa)
Gene transfer agent (GTA) like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3S6_POLGS
Gene transfer agent (GTA) {ECO:0000313|EMBL:KFI29430.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter
hypothetical protein
04302015_12_scaffold_508_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2254..2586
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3S7_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ72213.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 /
04302015_12_scaffold_508_4
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2525..4150
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8HBN7_RHOCA
Uncharacterized protein {ECO:0000313|EMBL:KGJ23459.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 550
hypothetical protein
04302015_12_scaffold_508_5
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4147..4821)
DNA (675bp) protein (225aa)
ArsR family transcriptional regulator id=2742638 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
ArsR family transcriptional regulator
Tax=BJP_IG2158_Rhodobacterales_64_37
04302015_12_scaffold_508_6
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4908..5753
DNA (846bp) protein (282aa)
Fatty acid hydroxylase id=2742637 bin=GWF1_Rhodobacteraceae_65_7 species=Celeribacter baekdonensis genus=Celeribacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
fatty acid hydroxylase
Tax=BJP_IG2158_Rhodobacterales_64_37
04302015_12_scaffold_508_7
unknown

Not on your lists

comp(5859..5975)
DNA (117bp) protein (39aa)

This feature has no annotations

04302015_12_scaffold_508_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5975..6979)
DNA (1005bp) protein (335aa)
qxtB; putative quinol oxidase subunit II transmembrane protein QxtB; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
Putative quinol oxidase subunit II transmembrane protein QxtB {ECO:0000313|EMBL:CCE94715.1}; EC=1.10.3.- {ECO:0000313|EMBL:CCE94715.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobac
Putative quinol oxidase subunit II transmembrane protein QxtB n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AAT5_RHIFH rbh
04302015_12_scaffold_508_9
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6976..8409)
DNA (1434bp) protein (478aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-) rbh
Cytochrome d ubiquinol oxidase subunit 1 n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DQS1_PHAG2 rbh
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:KII17054.1}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="
04302015_12_scaffold_508_10
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8467..9093)
DNA (627bp) protein (209aa)
peroxidase (EC:1.11.1.7)
Probable antioxidant protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZI7_9RHOB rbh
Probable antioxidant protein {ECO:0000313|EMBL:EAP79765.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
04302015_12_scaffold_508_11
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9336..9785
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZI8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP79766.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
hypothetical protein
04302015_12_scaffold_508_12
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9764..10126)
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI000370EEFF
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62521.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
ArsR family transcriptional regulator
04302015_12_scaffold_508_13
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10150..10374
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGE8_XANP2
Transmembrane protein {ECO:0000313|EMBL:KJV11070.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
04302015_12_scaffold_508_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10479..10964
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Dickeya zeae RepID=UPI00036FF06C
Uncharacterized protein {ECO:0000313|EMBL:KGD86188.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
04302015_12_scaffold_508_15
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11012..11437
DNA (426bp) protein (142aa)
YeeE/YedE family membrane protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DGN7_9RHIZ
Putative transporter component {ECO:0000313|EMBL:EDQ31524.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrop
hypothetical protein; K07112
04302015_12_scaffold_508_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11442..11876
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DGP1_9RHIZ
Permease {ECO:0000313|EMBL:KGF67124.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein; K07112
04302015_12_scaffold_508_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11899..12801
DNA (903bp) protein (301aa)
Beta-lactamase-like protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I758_AZOC5 rbh
beta-lactamase rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:BAF88080.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium cau
04302015_12_scaffold_508_18
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12844..13185
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWF3_BURP8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC75280.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phyma
04302015_12_scaffold_508_19
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13226..14905
DNA (1680bp) protein (560aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y1V6_9RHIZ rbh
HcaD protein {ECO:0000313|EMBL:BAQ49557.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
Sulfide:quinone oxidoreductase rbh
04302015_12_scaffold_508_20
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14925..16742
DNA (1818bp) protein (606aa)
Sulfate transporter, permease protein, putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVF8_POLGS rbh
Sulfate transporter permease
Sulfate transporter, permease protein, putative {ECO:0000313|EMBL:ADZ72676.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LM
04302015_12_scaffold_508_21
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16764..17360
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QJ00_9RHOB
Methyltransferase family protein {ECO:0000313|EMBL:KCV81600.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actiba
methyltransferase family protein
04302015_12_scaffold_508_22
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..17766
DNA (348bp) protein (116aa)
sulfurtransferase n=1 Tax=Loktanella vestfoldensis RepID=UPI00037BC2AE
Sulfurtransferase {ECO:0000313|EMBL:KJS26452.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
Rhodanese domain-containing protein
04302015_12_scaffold_508_23
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18029..18172)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZD0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW26087.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
hypothetical protein
Displaying 23 items

View Taxonomy