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04302015_12_scaffold_998

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_998_1
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
regB; sensor histidine kinase RegB (EC:2.7.13.3); K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
Sensor histidine kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKM6_9RHOB
04302015_12_scaffold_998_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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415..1035
DNA (621bp) protein (207aa)
protein senC n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B720B2
Protein senC {ECO:0000313|EMBL:ESW60691.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
electron transport protein SCO1/SenC; K07152
04302015_12_scaffold_998_3

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1065..1619
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AWK9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD60858.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
two component Fis family transcriptional regulator; K15012 two-component system, response regulator RegA
04302015_12_scaffold_998_4

Not on your lists

1689..2003
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BFD7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD60859.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histone family protein nucleoid-structuring protein H-NS; K03746 DNA-binding protein H-NS
04302015_12_scaffold_998_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2004..2876)
DNA (873bp) protein (291aa)
Transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EI62_9RHOB rbh
Transcriptional regulator {ECO:0000313|EMBL:ESW60688.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp.
hvrB; AHCY transcriptional activator HvrB
04302015_12_scaffold_998_6
unknown

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2974..3120
DNA (147bp) protein (49aa)

This feature has no annotations

04302015_12_scaffold_998_7
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3137..3661)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKM2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW60687.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
metal dependent phosphohydrolase; K06952
04302015_12_scaffold_998_8
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3731..4699)
DNA (969bp) protein (323aa)
Glycosyl transferase, family 8 n=2 Tax=Rhodobacter sphaeroides RepID=A3PG20_RHOS1
Uncharacterized protein {ECO:0000313|EMBL:KFI26845.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodoba
glycosyl transferase family protein
04302015_12_scaffold_998_9
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4767..5711)
DNA (945bp) protein (315aa)
Lipopolysaccharide 1 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LP95_DINSH
Uncharacterized protein {ECO:0000313|EMBL:KFI26845.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodoba
rafI; lipopolysaccharide 1
04302015_12_scaffold_998_10
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5807..6835)
DNA (1029bp) protein (343aa)
Zn-dependent alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Alcohol dehydrogenase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RBB9_9RHIZ rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIC51463.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG
04302015_12_scaffold_998_11
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6984..8372
DNA (1389bp) protein (463aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
ahcY; S-adenosyl-L-homocysteine hydrolase; K01251 adenosylhomocysteinase [EC:3.3.1.1] rbh
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B30659 rbh
04302015_12_scaffold_998_12
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8422..9624)
DNA (1203bp) protein (401aa)
Dolichol-p-glucose synthetase, (Glycosyltransferase) n=1 Tax=Roseobacter sp. CCS2 RepID=A4EG83_9RHOB rbh
Dolichol-p-glucose synthetase, (Glycosyltransferase) {ECO:0000313|EMBL:EBA13905.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.
dolichol-p-glucose synthetase
04302015_12_scaffold_998_13
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9846..10136
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EG82_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA13904.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. CC
hypothetical protein
Displaying 13 items

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