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04302015_12_scaffold_2066

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_2066_1
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..906)
DNA (906bp) protein (302aa)
webC; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ADE86691.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ADE86691.1};; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
UDP-N-acetylglucosamine 2-epimerase n=4 Tax=Rhodobacter capsulatus RepID=D5APX2_RHOCB rbh
04302015_12_scaffold_2066_2
Loktanella hongkongensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1020..2036
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Loktanella hongkongensis RepID=UPI0003798023
Uncharacterized protein {ECO:0000313|EMBL:EYD71276.1}; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella hongkon
hypothetical protein
04302015_12_scaffold_2066_3
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2033..2524)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:AII87954.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina te
04302015_12_scaffold_2066_4
unknown

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2621..2866
DNA (246bp) protein (82aa)

This feature has no annotations

04302015_12_scaffold_2066_5
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2938..3966)
DNA (1029bp) protein (343aa)
neuB; sialic acid synthase (EC:2.5.1.56 2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Loktanella vestfoldensis RepID=UPI00036E28BE rbh
N-acylneuraminate-9-phosphate synthase {ECO:0000313|EMBL:EBA12467.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ros
04302015_12_scaffold_2066_6
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4009..4566)
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1408890 species="B
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2'-5' RNA ligase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENW0_9RHOB
04302015_12_scaffold_2066_7
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4563..5705)
DNA (1143bp) protein (381aa)
Histone deacetylase superfamily n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WTQ9_RHOS5 rbh
histone deacetylase superfamily protein; K04768 acetoin utilization protein AcuC rbh
Histone deacetylase superfamily {ECO:0000313|EMBL:ABP70773.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacte
04302015_12_scaffold_2066_8
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5702..6220)
DNA (519bp) protein (173aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S091_9RHOB
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source
04302015_12_scaffold_2066_9
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6340..6867
DNA (528bp) protein (176aa)
NUDIX hydrolase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENA5_9RHOB
NUDIX domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_2066_10
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6979..7431
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S089_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25698.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
04302015_12_scaffold_2066_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7448..7945)
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WPK7_RHOS5
MarR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_2066_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8023..8298)
DNA (276bp) protein (92aa)
Putative uncharacterized protein id=2631609 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein; K09159 hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
04302015_12_scaffold_2066_13
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8295..8705)
DNA (411bp) protein (137aa)
Transcriptional regulator, XRE family n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WPK5_RHOS5
helix-turn-helix domain-containing protein
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABP69319.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhod
04302015_12_scaffold_2066_14
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8803..10005
DNA (1203bp) protein (401aa)
Aspartate aminotransferase {ECO:0000313|EMBL:ESW59861.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ESW59861.1};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] rbh
Aspartate aminotransferase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EFF7_9RHOB rbh
04302015_12_scaffold_2066_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10102..10506
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=2631541 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
04302015_12_scaffold_2066_16
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10579..10902)
DNA (324bp) protein (108aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EN33_9RHOB
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW61634.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
04302015_12_scaffold_2066_17
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11020..11427
DNA (408bp) protein (136aa)
DNA polymerase III subunit alpha n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKU4_9RHOB
DNA polymerase III subunit alpha {ECO:0000313|EMBL:ESW61633.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobac
Nucleic acid binding, OB-fold, tRNA/helicase-type
Displaying 17 items

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