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04302015_12_scaffold_8446

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_8446_1
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1059
DNA (1059bp) protein (353aa)
Sarcosine oxidase, alpha subunit family, heterotetrameric form {ECO:0000313|EMBL:EPX83760.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EPX83760.1};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobac
sarcosine oxidase subunit alpha; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Sarcosine oxidase, alpha subunit family, heterotetrameric form n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S0K4_9RHOB
04302015_12_scaffold_8446_2
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1052..1606
DNA (555bp) protein (185aa)
Sarcosine oxidase gamma subunit {ECO:0000313|EMBL:EPX83761.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EPX83761.1};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodoba
soxG; sarcosine oxidase, gamma subunit; K00305 sarcosine oxidase, subunit gamma [EC:1.5.3.1]
Sarcosine oxidase gamma subunit n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QQT3_9RHOB
04302015_12_scaffold_8446_3
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1844..2233
DNA (390bp) protein (130aa)
Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QW10_9RHOB
Transcriptional regulator, XRE family with cupin sensor {ECO:0000313|EMBL:EPX83762.1}; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellim
transcriptional regulator protein
04302015_12_scaffold_8446_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2379..3275
DNA (897bp) protein (299aa)
N-methylglutamate synthase subunit A n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC00_9RHOB rbh
glutamine amidotransferase class-II rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_8446_5
Rubellimicrobium thermophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3325..3936
DNA (612bp) protein (204aa)
N-methylglutamate synthase subunit B {ECO:0000313|EMBL:EPX83770.1}; EC=2.1.1.21 {ECO:0000313|EMBL:EPX83770.1};; TaxID=1123069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; R
N-methylglutamate synthase subunit B n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9S0L4_9RHOB rbh
glutamate synthase subunit alpha domain protein
04302015_12_scaffold_8446_6
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4034..5362
DNA (1329bp) protein (443aa)
Glutamate synthase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELX9_9RHOB rbh
Glutamate synthase {ECO:0000313|EMBL:ESW62043.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA1
glutamate synthase-like protein rbh
04302015_12_scaffold_8446_7
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5440..5772
DNA (333bp) protein (111aa)
glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase III n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQ30_9RHOB
Glutamine synthetase III {ECO:0000313|EMBL:EAP76570.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinh
04302015_12_scaffold_8446_8
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5759..6607
DNA (849bp) protein (283aa)
glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EP80_9RHOB
Glutamine synthetase {ECO:0000313|EMBL:ESW62044.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACI
04302015_12_scaffold_8446_9
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6809..7306
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AGY5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAD56939.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnaba
hypothetical protein
04302015_12_scaffold_8446_10

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7303..7803
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3S792_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN65064.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
04302015_12_scaffold_8446_11
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7957..8172)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWM7_9RHOB
Cupin {ECO:0000313|EMBL:KJS42029.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
RmlC-type cupin domain-containing protein
04302015_12_scaffold_8446_12
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8274..8687
DNA (414bp) protein (138aa)
Universal stress protein UspA n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPA2_9RHOB
Universal stress protein UspA {ECO:0000313|EMBL:ESW62002.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter
hypothetical protein
04302015_12_scaffold_8446_13
unknown

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8856..8927
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 13 items

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