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04302015_12_scaffold_3155

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_3155_1
unknown

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)

This feature has no annotations

04302015_12_scaffold_3155_2
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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231..1271
DNA (1041bp) protein (347aa)
Aldo/keto reductase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WV22_RHOS5 rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ABP71236.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroide
04302015_12_scaffold_3155_3
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1330..1944
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S045_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25654.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
hypothetical protein
04302015_12_scaffold_3155_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1941..2438
DNA (498bp) protein (166aa)
Lipocalin family protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WV20_RHOS5
Lipocalin family protein; K03098 outer membrane lipoprotein Blc
Lipocalin family protein {ECO:0000313|EMBL:ABP71234.1}; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphae
04302015_12_scaffold_3155_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2447..3304)
DNA (858bp) protein (286aa)
DNA-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EN26_9RHOB rbh
DNA-binding protein {ECO:0000313|EMBL:ESW61562.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA
XRE family transcriptional regulator
04302015_12_scaffold_3155_6

Not on your lists

3408..4421
DNA (1014bp) protein (338aa)
Fatty acid desaturase family protein n=1 Tax=uncultured bacterium RepID=K2BIP5_9BACT rbh
Fatty acid desaturase family protein {ECO:0000313|EMBL:EKD61919.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative fatty acid desaturase rbh
04302015_12_scaffold_3155_7
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4341..4637)
DNA (297bp) protein (99aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J0T9_RHOS4
hypothetical protein
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA79595.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
04302015_12_scaffold_3155_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..4876)
DNA (210bp) protein (70aa)
NUDIX hydrolase id=2798774 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
NUDIX hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
04302015_12_scaffold_3155_9
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4848..5252)
DNA (405bp) protein (135aa)
zinc-finger protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B36897
Uncharacterized protein {ECO:0000313|EMBL:KAJ55328.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
hypothetical protein
04302015_12_scaffold_3155_10
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5424..5912
DNA (489bp) protein (163aa)
Putative signal transduction protein with EFhand domain n=1 Tax=Citreicella sp. SE45 RepID=D0D8M5_9RHOB
Putative signal transduction protein with EFhand domain {ECO:0000313|EMBL:EEX14144.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicel
calcium-binding EF-hand domain-containing protein
04302015_12_scaffold_3155_11
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5961..6545
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodobacter sp. SW2 RepID=C8S052_9RHOB
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEW25661.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" so
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
04302015_12_scaffold_3155_12
unknown

Not on your lists

6548..6910
DNA (363bp) protein (121aa)

This feature has no annotations

04302015_12_scaffold_3155_13
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6916..7416
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGU6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW59195.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein
04302015_12_scaffold_3155_14
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7421..8251)
DNA (831bp) protein (277aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S055_9RHOB
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:EEW25664.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodoba
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator
04302015_12_scaffold_3155_15
Oceaniovalibus guishaninsula, Oceaniovalibus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9030..9242
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HQQ3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKE45099.1}; TaxID=1231392 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceaniovalibus.;" source="Oceaniovalibus
hypothetical protein
04302015_12_scaffold_3155_16
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9233..9952
DNA (720bp) protein (240aa)
HAD family hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
phosphatase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5A971
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EEW25666.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;"
04302015_12_scaffold_3155_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10044..11591
DNA (1548bp) protein (516aa)
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-] rbh
methyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B52B72 rbh
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 17 items

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