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04302015_12_scaffold_202

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_202_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2663)
DNA (2661bp) protein (887aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
pyruvate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3DE3
Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component {ECO:0000313|EMBL:AAZ96605.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenoph
04302015_12_scaffold_202_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2902..3885)
DNA (984bp) protein (328aa)
pyruvate dehydrogenase E1 subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
pyruvate dehydrogenase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI0003720846
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..4941)
DNA (1002bp) protein (334aa)
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=12494005 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dehydrogenase complex, E1 component subunit alpha; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5057..6511
DNA (1455bp) protein (485aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Leucyl aminopeptidase id=1326794 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6543..7184
DNA (642bp) protein (214aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-); K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] rbh
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003805446 rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_202_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7189..8547)
DNA (1359bp) protein (453aa)
Coenzyme F390 synthetase-like protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Coenzyme F390 synthetase-like protein id=1326786 bin=GWE1_T_denit_62_9 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8544..10292)
DNA (1749bp) protein (583aa)
Putative uncharacterized protein id=1326785 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..11919)
DNA (1659bp) protein (553aa)
acetolactate synthase, large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036834F0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12085..12723)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031CE66B
glutathione S-transferase domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12764..13369)
DNA (606bp) protein (202aa)
Nitroreductase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKU3_9DELT rbh
nitroreductase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13402..14490)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00031BD6CA rbh
NADH:flavin oxidoreductase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14516..15355)
DNA (840bp) protein (280aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase id=1326782 bin=GWE1_T_denit_62_9 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15363..16472)
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000364247C
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16567..17646)
DNA (1080bp) protein (360aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
transaldolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037FC0AF rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17805..18905
DNA (1101bp) protein (367aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E8789 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18930..20093)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL01_THIDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ96620.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
04302015_12_scaffold_202_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20124..20825)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL00_THIDA rbh
hypothetical protein; K06997 rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ96621.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
04302015_12_scaffold_202_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20837..22132)
DNA (1296bp) protein (432aa)
glycine C-acetyltransferase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] rbh
Glycine C-acetyltransferase {ECO:0000313|EMBL:AAZ96622.1}; EC=2.3.1.29 {ECO:0000313|EMBL:AAZ96622.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenop
Glycine C-acetyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKZ9_THIDA rbh
04302015_12_scaffold_202_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22480..23298
DNA (819bp) protein (273aa)
Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKZ8_THIDA rbh
two component LuxR family transcriptional regulator rbh
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ96623.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
04302015_12_scaffold_202_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23521..25245
DNA (1725bp) protein (575aa)
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Putative Adenylate/Guanylate Cyclase id=1326777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_21
unknown

Not on your lists

comp(25307..25648)
DNA (342bp) protein (114aa)

This feature has no annotations

04302015_12_scaffold_202_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25744..26040)
DNA (297bp) protein (99aa)
hypothetical protein id=1326773 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_202_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26095..27255)
DNA (1161bp) protein (387aa)
Major facilitator superfamily protein id=1326772 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
major facilitator superfamily protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_202_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27501..29942
DNA (2442bp) protein (814aa)
Putative ATP-dependent protease LA, putative id=1326770 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
putative ATP-dependent protease LA rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30002..30478
DNA (477bp) protein (159aa)
YbaK-like protein id=1326769 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
YbaK-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_26
unknown

Not on your lists

comp(30623..30904)
DNA (282bp) protein (94aa)

This feature has no annotations

04302015_12_scaffold_202_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30981..31172
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003609489
putative aspartyl protease; K06985 aspartyl protease family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31312..31518
DNA (207bp) protein (69aa)
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Possible Cold-shock DNA-binding domain protein id=1326767 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31626..32168
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003829DA7 rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_202_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32165..33040)
DNA (876bp) protein (292aa)
SAM-dependent methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000372644A
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 38 in total

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