name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
04302015_12_scaffold_280_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(143..1255)
|
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=12497943 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Tax=GWE1_Thiobacillus_62_9_curated
|
|
04302015_12_scaffold_280_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1296..2357)
|
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
rbh
3-isopropylmalate dehydrogenase id=1333552 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
04302015_12_scaffold_280_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2397..3035)
|
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] id=12493945 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3041..3175)
|
entericidin ecnab id=12497946 bin=THIO_MID species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3186..4589)
|
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase large subunit id=1333549 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4682..5821)
|
MFS transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EA599
rbh
putative transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
Tax=GWE1_Thiobacillus_62_9_curated
|
|
04302015_12_scaffold_280_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6181..6819
|
diguanylate cyclase id=12497949 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6816..7652
|
cobyrinic acid a,c-diamide synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CB8DD
rbh
cobyrinic acid a,c-diamide synthase; K04562 flagellar biosynthesis protein FlhG
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7691..8470)
|
hypothetical protein id=12493940 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8583..9227
|
Putative uncharacterized protein id=1349958 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9230..9415
|
putative isomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
Putative isomerase id=1349959 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9453..11249
|
excinuclease ABC subunit C n=1 Tax=Thiobacillus thioparus RepID=UPI00036779C0
rbh
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11249..11815
|
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=1349961 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_trna_1
unknown
|
Not on your lists |
11879..11951
|
transferRNA
|
|
04302015_12_scaffold_280_trna_2
unknown
|
Not on your lists |
12024..12094
|
transferRNA
|
|
04302015_12_scaffold_280_trna_3
unknown
|
Not on your lists |
12122..12205
|
transferRNA
|
|
04302015_12_scaffold_280_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12354..12782
|
Ribosome maturation factor RimP id=1349962 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein; K09748 ribosome maturation factor RimP
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12804..14282
|
peptidase M54 n=1 Tax=Thiobacillus thioparus RepID=UPI00037EA69E
NusA antitermination factor; K02600 N utilization substance protein A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14299..17112
|
translation initiation factor IF-2 n=1 Tax=Thiobacillus thioparus RepID=UPI000364F979
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17112..17531
|
ribosome-binding factor A n=1 Tax=Thiobacillus thioparus RepID=UPI000372DC32
ribosome-binding factor A; K02834 ribosome-binding factor A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17528..18493
|
tRNA pseudouridine synthase B n=1 Tax=Thiobacillus thioparus RepID=UPI00037F3664
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
04302015_12_scaffold_280_19
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18669..19316
|
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036CC83D
LuxR family transcriptional regulator
Tax=RBG_16_Gallionellales_56_9_curated
|
|
04302015_12_scaffold_280_20
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19593..19856
|
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6X5K6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76991.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
prepilin protein
|
|
04302015_12_scaffold_280_21
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20108..21214
|
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y3P4_9RHOO
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO76992.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
|
|
04302015_12_scaffold_280_22
unknown
|
Not on your lists |
21433..22164
|
This feature has no annotations |
|
04302015_12_scaffold_280_23
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22217..22927
|
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6YAI6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO76994.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
|
|
04302015_12_scaffold_280_24
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22924..23586
|
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AMY4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EUJ09327.1}; Flags: Precursor;; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophila
hypothetical protein
|
|
04302015_12_scaffold_280_25
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23583..23768
|
Uncharacterized protein n=2 Tax=Thauera RepID=N6YT31_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EUJ09328.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;
|
|
04302015_12_scaffold_280_26
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23779..24633
|
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZL56_9RHOO
rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EUJ09329.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacter
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
|
|
04302015_12_scaffold_280_27
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24728..26209
|
Type II and III secretion system protein n=1 Tax=Thauera sp. 63 RepID=N6Y4G4_9RHOO
rbh
Type II and III secretion system protein {ECO:0000313|EMBL:ENO76998.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp
type II and III secretion system protein; K02280 pilus assembly protein CpaC
rbh
|