ggKbase home page

04302015_12_scaffold_999

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_999_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(176..1339)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein id=1335132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1427..2257
DNA (831bp) protein (277aa)
pteridine reductase; K03793 pteridine reductase [EC:1.5.1.33]
Short-chain dehydrogenase/reductase (SDR) superfamily id=1335133 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2235..3668
DNA (1434bp) protein (478aa)
sbcB; exonuclease I (EC:3.1.11.1); K01141 exodeoxyribonuclease I [EC:3.1.11.1] rbh
Exodeoxyribonuclease I n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVF5_JANMA rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3849..5045
DNA (1197bp) protein (399aa)
3-oxoacyl-(acyl carrier protein) synthase I (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] id=12493260 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
3-oxoacyl-(acyl carrier protein) synthase I (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5042..5857
DNA (816bp) protein (272aa)
hypothetical protein id=12493261 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5848..6312
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA6_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6309..7028
DNA (720bp) protein (240aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=12493263 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7025..8335
DNA (1311bp) protein (437aa)
sodium:proton antiporter n=1 Tax=Lamprocystis purpurea RepID=UPI000365CF5F rbh
sodium/hydrogen exchanger family protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8448..8876
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000318C35D
Uncharacterized protein {ECO:0000313|EMBL:KJB97323.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
04302015_12_scaffold_999_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9945..10712)
DNA (768bp) protein (256aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] rbh
Methyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA3_THIDA rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10804..11427)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWX4_RAMTT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11465..12241)
DNA (777bp) protein (259aa)
glycosyl transferase family protein id=12493264 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
glycosyl transferase family protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12231..12953)
DNA (723bp) protein (241aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFA1_THIDA rbh
phospholipid/glycerol acyltransferase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12950..13975)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF99_THIDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ98715.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
04302015_12_scaffold_999_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13972..15306)
DNA (1335bp) protein (445aa)
Oxidoreductase, FAD-binding, putative n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF98_THIDA rbh
oxidoreductase, FAD-binding rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_999_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15533..16537
DNA (1005bp) protein (335aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
UGMP family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036156D1 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 16 items

View Taxonomy