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04302015_12_scaffold_1260

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1260_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..500)
DNA (498bp) protein (166aa)
cytochrome P450 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB09
Putative cytochrome P450 {ECO:0000313|EMBL:GAO40028.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
cytochrome P450
04302015_12_scaffold_1260_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(570..1007)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYA6_9SPHN
DNA, contig: SP655 {ECO:0000313|EMBL:GAN15351.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
04302015_12_scaffold_1260_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1012..1431)
DNA (420bp) protein (140aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC603
ribH; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
04302015_12_scaffold_1260_4
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1564..2865)
DNA (1302bp) protein (434aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Novosphingobium sp. AP12 RepID=J2P804_9SPHN rbh
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33373.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
04302015_12_scaffold_1260_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2921..3544)
DNA (624bp) protein (208aa)
ribE; riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9]
riboflavin synthase subunit alpha n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4DF
Riboflavin synthase {ECO:0000313|EMBL:GAO40025.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas chang
04302015_12_scaffold_1260_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3548..4501)
DNA (954bp) protein (318aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amin rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Sphingomonas sp. S17 RepID=F3WYB1_9SPHN rbh
RibD protein {ECO:0000313|EMBL:GAN15356.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis
04302015_12_scaffold_1260_7
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4534..4881)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037FD90B
Uncharacterized protein {ECO:0000313|EMBL:KHA63343.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
04302015_12_scaffold_1260_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4944..6269)
DNA (1326bp) protein (442aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1470591 species="Bacteria; P
glutamyl-tRNA ligase (EC:6.1.1.17)
glutamyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288EDE4 rbh
04302015_12_scaffold_1260_9
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(6266..6676)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00035ECBE4
hypothetical protein
Tax=Caldatribacterium californiense
04302015_12_scaffold_1260_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..6927)
DNA (255bp) protein (85aa)
UPI0003D0603D related cluster n=1 Tax=unknown RepID=UPI0003D0603D
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
04302015_12_scaffold_1260_11
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7046..7981
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
ribose-phosphate pyrophosphokinase n=1 Tax=Sphingomonas RepID=UPI0002887616 rbh
04302015_12_scaffold_1260_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8725..9291)
DNA (567bp) protein (189aa)
fatty acid hydroxylase; K15746 beta-carotene 3-hydroxylase [EC:1.14.13.129]
carotene hydroxylase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC60C
Uncharacterized protein {ECO:0000313|EMBL:AHE55981.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
04302015_12_scaffold_1260_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9375..10574
DNA (1200bp) protein (400aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558, ECO:0000313|EMBL:AJP73583.1};; Succinyl-CoA synthetase subunit beta {ECO:
sucC; succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
malate--CoA ligase subunit beta n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4D7 rbh
04302015_12_scaffold_1260_14
unknown

Not on your lists

10585..10809
DNA (225bp) protein (75aa)

This feature has no annotations

Displaying 14 items

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