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04302015_12_scaffold_2233

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_2233_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..507)
DNA (507bp) protein (169aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Sphingomonas RepID=UPI0002893D15
Branched-chain alpha-keto acid dehydrogenase E1 component beta subunit {ECO:0000313|EMBL:GAM00510.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
04302015_12_scaffold_2233_2
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(614..1900)
DNA (1287bp) protein (429aa)
bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] rbh
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFB2 rbh
2-oxoisovalerate dehydrogenase {ECO:0000313|EMBL:KHA63765.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
04302015_12_scaffold_2233_3
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1986..2891)
DNA (906bp) protein (302aa)
haloalkane dehalogenase (EC:3.8.1.5); K01563 haloalkane dehalogenase [EC:3.8.1.5]
UPI0003D03EF1 related cluster n=1 Tax=unknown RepID=UPI0003D03EF1 rbh
Haloalkane dehalogenase {ECO:0000313|EMBL:ESZ86795.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
04302015_12_scaffold_2233_4
unknown

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3030..3221
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_12_scaffold_2233_5
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3405..3965)
DNA (561bp) protein (187aa)
2-keto-4-pentenoate hydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002632117
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KHA63758.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
fumarylacetoacetate hydrolase
04302015_12_scaffold_2233_6
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4042..4359)
DNA (318bp) protein (106aa)
2-keto-4-pentenoate hydratase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002883B36
Uncharacterized protein {ECO:0000313|EMBL:GAM00925.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
fumarylacetoacetate hydrolase
04302015_12_scaffold_2233_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..5652
DNA (1152bp) protein (384aa)
long-chain acyl-CoA dehydrogenase (EC:1.3.99.13); K00255 long-chain-acyl-CoA dehydrogenase [EC:1.3.99.13]
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas RepID=UPI000288472C rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO39895.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
04302015_12_scaffold_2233_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5750..7186
DNA (1437bp) protein (479aa)
amidohydrolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4D1 rbh
Amidohydrolase {ECO:0000313|EMBL:AJP72177.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
amidohydrolase rbh
04302015_12_scaffold_2233_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7183..8496
DNA (1314bp) protein (438aa)
amidohydrolase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4D0 rbh
Amidohydrolase {ECO:0000313|EMBL:AJP74439.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8
amidohydrolase 3 rbh
04302015_12_scaffold_2233_10

Not on your lists

8636..9838
DNA (1203bp) protein (401aa)
peptidase S41 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036096BD
Uncharacterized protein {ECO:0000313|EMBL:AHN97775.1}; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
peptidase S41
04302015_12_scaffold_2233_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10402..11868
DNA (1467bp) protein (489aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
DEAD/DEAH box helicase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002880C7F rbh
DNA, contig: SP656 {ECO:0000313|EMBL:GAN15382.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
04302015_12_scaffold_2233_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..12691)
DNA (666bp) protein (222aa)
NADH dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4CE rbh
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29412.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
nitroreductase family
04302015_12_scaffold_2233_13
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12799..13971
DNA (1173bp) protein (391aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4CD rbh
Putative acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAO39837.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
04302015_12_scaffold_2233_14
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14108..14890
DNA (783bp) protein (261aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCFFE rbh
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29394.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
short-chain dehydrogenase/reductase SDR
04302015_12_scaffold_2233_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15008..15517
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Sphingomonas wittichii RepID=A5VA45_SPHWW
hypothetical protein; K09983 hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_12_scaffold_2233_16
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15531..15728
DNA (198bp) protein (66aa)
putative thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
thioesterase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4CB
Thioesterase {ECO:0000313|EMBL:ESZ88251.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.
Displaying 16 items

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