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04302015_12_scaffold_1151

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1151_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..709
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ
transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_1151_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

706..1575
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_1151_3
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1586..3337
DNA (1752bp) protein (584aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BRK1_ENTAE rbh
ATP-dependent endonuclease of the OLD family-like protein
OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein {ECO:0000313|EMBL:CEE91184.1}; TaxID=1437825 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
04302015_12_scaffold_1151_4
Providencia sneebia, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3334..5112
DNA (1779bp) protein (593aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1141660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
UPI0003A1843C related cluster n=1 Tax=unknown RepID=UPI0003A1843C rbh
ATP-dependent DNA helicase UvrD/PcrA
04302015_12_scaffold_1151_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5494..5949)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB7BA
XRE family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_1151_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6642..9191)
DNA (2550bp) protein (850aa)
Heavy metal efflux pump CzcA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ81_THIDA
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ97286.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
04302015_12_scaffold_1151_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9157..9753)
DNA (597bp) protein (199aa)
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA id=12496586 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ97286.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
04302015_12_scaffold_1151_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..11285)
DNA (1488bp) protein (496aa)
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12498648 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97287.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour
04302015_12_scaffold_1151_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11282..12571)
DNA (1290bp) protein (430aa)
CzcC family heavy metal RND efflux outer membrane protein id=12498649 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CzcC family heavy metal RND efflux outer membrane protein
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydr
04302015_12_scaffold_1151_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12685..13023)
DNA (339bp) protein (113aa)
hypothetical protein id=12498650 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97289.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
04302015_12_scaffold_1151_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13098..14492)
DNA (1395bp) protein (465aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-) id=12496582 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14489..15181)
DNA (693bp) protein (231aa)
two component heavy metal response transcriptional regulator id=12496581 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
two component heavy metal response transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15378..16985
DNA (1608bp) protein (536aa)
Multi-Cu(II) oxidase CopA id=1351588 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
copper-resistance protein, CopA family
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17015..18076
DNA (1062bp) protein (354aa)
copper resistance protein B id=12497697 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
copper resistance protein B rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18123..18647
DNA (525bp) protein (175aa)
blue (type1) copper domain-containing protein id=12497696 bin=THIO_MID species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
blue (type1) copper domain-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18763..19200
DNA (438bp) protein (146aa)
hypothetical protein id=12497695 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19212..19547
DNA (336bp) protein (112aa)
Conserved hypothetical secreted protein id=1351592 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19580..20065
DNA (486bp) protein (162aa)
hypothetical protein id=12497693 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20136..20405
DNA (270bp) protein (90aa)
hypothetical protein id=1351594 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20565..21041
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=1351595 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21295..21522
DNA (228bp) protein (76aa)
Uncharacterized protein id=1351596 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_1151_22
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21723..21962
DNA (240bp) protein (80aa)
hypothetical protein id=12497688 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36050.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
04302015_12_scaffold_1151_23
unknown

Not on your lists

22026..22193
DNA (168bp) protein (56aa)
id=12497687 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
id=12497687 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
04302015_12_scaffold_1151_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22197..22619
DNA (423bp) protein (141aa)
hypothetical protein
id=12497687 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
04302015_12_scaffold_1151_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22698..23627
DNA (930bp) protein (310aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=12498619 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ98693.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source
Displaying 25 items

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