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04302015_12_scaffold_5

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Displaying items 1-30 of 293 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_5_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..978)
DNA (978bp) protein (326aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003716EAE rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_5_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1038..1622)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D8EC1 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1647..2975)
DNA (1329bp) protein (443aa)
Fe-S oxidoreductase n=1 Tax=Thiobacillus thioparus RepID=UPI00037C275D rbh
putative ferredoxin rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3064..3483)
DNA (420bp) protein (140aa)
putative oxidative stress related rubrerythrin protein id=12497253 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative oxidative stress related rubrerythrin protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3770..4183
DNA (414bp) protein (138aa)
methionine sulfoxide reductase B (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=12497254 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
methionine sulfoxide reductase B (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4187..4891
DNA (705bp) protein (235aa)
Conserved hyothetical protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJU2_THIDA rbh
hypothetical protein
Conserved hyothetical protein {ECO:0000313|EMBL:AAZ97057.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
04302015_12_scaffold_5_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4964..5902
DNA (939bp) protein (313aa)
Putative hydrolase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJU3_THIDA
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AAZ97056.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="
04302015_12_scaffold_5_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5912..6256)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A858B
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6253..7680)
DNA (1428bp) protein (476aa)
DEAD/DEAH box helicase id=12497258 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DEAD/DEAH box helicase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7708..8466)
DNA (759bp) protein (253aa)
hypothetical protein id=12497259 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..9559)
DNA (1083bp) protein (361aa)
lipoprotein; K07287 lipoprotein-34 id=12497260 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
lipoprotein; K07287 lipoprotein-34
Outer membrane protein assembly factor BamC {ECO:0000255|HAMAP-Rule:MF_00924}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilac
04302015_12_scaffold_5_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9573..10463)
DNA (891bp) protein (297aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] id=12497261 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
dapA; dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10540..11295)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E213C
flagellar biosynthetic FliR transmembrane protein; K02421 flagellar biosynthetic protein FliR
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11292..11546)
DNA (255bp) protein (85aa)
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ id=12497263 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11546..12292)
DNA (747bp) protein (249aa)
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP id=12494979 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_5_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12289..12615)
DNA (327bp) protein (109aa)
flagellar protein FliO; K02418 flagellar protein FliO/FliZ id=12497265 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
flagellar protein FliO; K02418 flagellar protein FliO/FliZ
Probable Flagellar protein FliO {ECO:0000313|EMBL:AAZ97047.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillu
04302015_12_scaffold_5_17
unknown

Not on your lists

comp(12612..13136)
DNA (525bp) protein (175aa)
hypothetical protein id=12497266 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein id=12497266 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
04302015_12_scaffold_5_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13136..13585)
DNA (450bp) protein (150aa)
hypothetical protein id=12497267 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97045.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
04302015_12_scaffold_5_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13582..14979)
DNA (1398bp) protein (466aa)
flagella ATPase FliI (EC:3.6.3.15); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] id=12497268 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flagella ATPase FliI (EC:3.6.3.15); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
Flagella ATPase FliI {ECO:0000313|EMBL:AAZ97044.1}; EC=3.6.3.15 {ECO:0000313|EMBL:AAZ97044.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
04302015_12_scaffold_5_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14986..15585)
DNA (600bp) protein (200aa)
flagellar assembly protein FliH; K02411 flagellar assembly protein FliH id=12497269 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flagellar assembly protein FliH; K02411 flagellar assembly protein FliH
Flagellar assembly protein FliH {ECO:0000313|EMBL:AAZ97043.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thioba
04302015_12_scaffold_5_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15582..16547)
DNA (966bp) protein (322aa)
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG id=12497270 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000313|EMBL:AAZ97042.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Th
04302015_12_scaffold_5_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17905)
DNA (1362bp) protein (454aa)
flagellar biosynthesis/type III secretory pathway lipoprotein FliF; K02409 flagellar M-ring protein FliF id=12497271 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
flagellar biosynthesis/type III secretory pathway lipoprotein FliF; K02409 flagellar M-ring protein FliF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17988..18440)
DNA (453bp) protein (151aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] id=12497272 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_24
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18509..20431)
DNA (1923bp) protein (641aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B1085 rbh
integral membrane sensor signal transduction histidine kinase
04302015_12_scaffold_5_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20428..22047)
DNA (1620bp) protein (540aa)
peptidoglycan-binding LysM id=12497274 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Putative LysM motif protein {ECO:0000313|EMBL:CDW93757.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
peptidoglycan-binding lysin domain-containing protein
04302015_12_scaffold_5_26
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22047..22730)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003690B53 rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EUJ10586.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilale
winged helix family two component transcriptional regulator
04302015_12_scaffold_5_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22804..24312)
DNA (1509bp) protein (503aa)
adenylate cyclase id=12497276 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
adenylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_12_scaffold_5_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24377..26452
DNA (2076bp) protein (692aa)
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] id=12497277 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] rbh
04302015_12_scaffold_5_29
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26498..28714)
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAI6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14295.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
04302015_12_scaffold_5_30
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28884..29528)
DNA (645bp) protein (215aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZL17_THASP
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACK52975.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source=
Displaying items 1-30 of 293 in total

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