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04302015_12_scaffold_580

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_580_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1..249
DNA (249bp) protein (83aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase {ECO:0000313|EMBL:BAN34548.1}; EC=2.4.1.1 {ECO:0000313|EMBL:BAN34548.1};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellac
Alpha-glucan phosphorylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABC1_9PROT
04302015_12_scaffold_580_2
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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246..1496
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7PAN0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERS91660.1}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.
major facilitator transporter
04302015_12_scaffold_580_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2125..2421
DNA (297bp) protein (99aa)
Histone-like DNA-binding protein id=1331615 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=GWE1_Thiobacillus_62_9_curated
04302015_12_scaffold_580_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2854..3117
DNA (264bp) protein (88aa)
transposase IS1404 n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B2EAF0
tnpA; IS3/IS407-type transposase; K07497 putative transposase
IS3/IS407-type transposase {ECO:0000313|EMBL:EHY76819.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stut
04302015_12_scaffold_580_5
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3150..3959
DNA (810bp) protein (270aa)
Putative transposase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B4R4_PSEAC rbh
Putative transposase {ECO:0000313|EMBL:GAD64824.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcalige
transposase
04302015_12_scaffold_580_6
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4428..4670
DNA (243bp) protein (81aa)
hypothetical protein
hypothetical protein id=12496583 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84647.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea
04302015_12_scaffold_580_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4784..6073
DNA (1290bp) protein (430aa)
CzcC family heavy metal RND efflux outer membrane protein id=12498649 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
CzcC family heavy metal RND efflux outer membrane protein
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydr
04302015_12_scaffold_580_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6070..7560
DNA (1491bp) protein (497aa)
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12498648 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Secretion protein HlyD {ECO:0000313|EMBL:AAZ97287.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour
04302015_12_scaffold_580_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7557..10682
DNA (3126bp) protein (1042aa)
Heavy metal efflux pump CzcA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ81_THIDA rbh
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ97286.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
04302015_12_scaffold_580_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10737..11786
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DE802
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_12_scaffold_580_11
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12122..13555)
DNA (1434bp) protein (478aa)
Transposase n=1 Tax=Pseudomonas sp. GM21 RepID=J2N2I5_9PSED rbh
Transposase DDE domain protein {ECO:0000313|EMBL:KFB66215.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK
transposase IS4
04302015_12_scaffold_580_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14077..14721
DNA (645bp) protein (215aa)
tyrosine recombinase XerC n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D94DA rbh
tyrosine recombinase XerC; K03733 integrase/recombinase XerC
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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