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04302015_12_scaffold_1518

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_1518_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..693)
DNA (693bp) protein (231aa)
Thioredoxin n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F86_THICR
thioredoxin; K05838 putative thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABB42187.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (
04302015_12_scaffold_1518_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(700..1896)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00035D81B5
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
Tax=CG_Thiomicrospira_01
04302015_12_scaffold_1518_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2000..3298)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003668BD9
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
Tax=CG_Thiomicrospira_01
04302015_12_scaffold_1518_trna_1
unknown

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3631..3703
DNA (73bp)
transferRNA
04302015_12_scaffold_1518_4
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3864..4367
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000374F7F9
Damage-inducible protein CinA {ECO:0000313|EMBL:KDN96592.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogen
CinA-like protein; K03743
04302015_12_scaffold_1518_5
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4490..5509
DNA (1020bp) protein (340aa)
Protein RecA n=1 Tax=Methylophaga lonarensis MPL RepID=M7PGC8_9GAMM rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1286106 species="Bacteria; Proteoba
recombinase A; K03553 recombination protein RecA
04302015_12_scaffold_1518_6
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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5496..5957
DNA (462bp) protein (154aa)
Regulatory protein RecX n=1 Tax=Vibrio cholerae RC385 RepID=D7HDP3_VIBCL
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=345074 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" sour
recX; recombination regulator RecX; K03565 regulatory protein
04302015_12_scaffold_1518_7
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5957..8584
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYA_THICR rbh
04302015_12_scaffold_1518_8
Pseudomonas sp., Proteobacteria, Bacteria

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8621..9583
DNA (963bp) protein (321aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase; EC=2.7.2.4;; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
Aspartokinase n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I6Z9_PSEE4
Displaying 9 items

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