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04302015_12_scaffold_752

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_752_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..520
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9D3_9GAMM
Permease {ECO:0000313|EMBL:AHF00851.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aero
hypothetical protein; K07086
04302015_12_scaffold_752_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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554..841
DNA (288bp) protein (96aa)
Nitrogen regulatory protein P-II n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9D4_9GAMM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHF00852.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="
nitrogen regulatory protein P-II
04302015_12_scaffold_752_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1091..2314
DNA (1224bp) protein (408aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] rbh
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000362DA12 rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimi
04302015_12_scaffold_752_4
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2311..3240
DNA (930bp) protein (310aa)
putative mutT protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Putative mutT protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCK8_CELJU
Putative mutT protein {ECO:0000313|EMBL:ACE83416.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus
04302015_12_scaffold_752_5
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3249..4145
DNA (897bp) protein (299aa)
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
UbiA prenyltransferase n=1 Tax=Alishewanella aestuarii B11 RepID=J2II41_9ALTE
UbiA prenyltransferase {ECO:0000313|EMBL:EJI86444.1}; TaxID=1197174 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella ae
04302015_12_scaffold_752_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4147..5916)
DNA (1770bp) protein (590aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source
PAS fold family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JN00_9BACT rbh
signal transduction histidine kinase
04302015_12_scaffold_752_7
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5917..7035)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA03_SORCE rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_12_scaffold_752_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7090..8085)
DNA (996bp) protein (332aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FF1_THICR rbh
04302015_12_scaffold_752_9
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8238..9332
DNA (1095bp) protein (365aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:
Chorismate synthase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=AROC_HAHCH rbh
04302015_12_scaffold_752_10
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9352..10512
DNA (1161bp) protein (387aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E0K9_9GAMM
transporter
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_12_scaffold_752_11
unknown

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comp(10520..10660)
DNA (141bp) protein (47aa)

This feature has no annotations

04302015_12_scaffold_752_12
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10765..11835
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558309 rbh
3-isopropylmalate dehydrogenase
04302015_12_scaffold_752_13
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11857..12411
DNA (555bp) protein (185aa)
Peptidase M23B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH9_THICR
peptidase M23B
Peptidase M23 {ECO:0000313|EMBL:KDN95508.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.
Displaying 13 items

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