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04302015_12_scaffold_7277

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_7277_1
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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229..609
DNA (381bp) protein (127aa)
Monoheme cytochrome SoxX (Sulfur oxidation) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I23_THICR
cytochrome c, class I
Monoheme cytochrome SoxX (Sulfur oxidation) {ECO:0000313|EMBL:ABB41200.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; T
04302015_12_scaffold_7277_2
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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645..1112
DNA (468bp) protein (156aa)
Thiosulfate-binding protein SoxY n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I24_THICR
sulfur oxidation protein SoxY-like
Thiosulfate-binding protein SoxY {ECO:0000313|EMBL:ABB41199.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospi
04302015_12_scaffold_7277_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1175..1489
DNA (315bp) protein (105aa)
Sulfur oxidation protein SoxZ n=1 Tax=uncultured organism RepID=E3T354_9ZZZZ
Phosphatase {ECO:0000313|EMBL:KDN96886.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
04302015_12_scaffold_7277_4
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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1577..2461
DNA (885bp) protein (295aa)
SoxAX cytochrome complex subunit A {ECO:0000250|UniProtKB:Q8RLX0}; EC=1.8.2.- {ECO:0000269|PubMed:18641134};; Cytochrome c551 subunit monoheme {ECO:0000303|PubMed:18641134}; Protein SoxA {ECO:0000250|
SoxAX cytochrome complex subunit A n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=SOXA_CHLTE
soxA; sulfur oxidation protein SoxA
04302015_12_scaffold_7277_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3100..3921)
DNA (822bp) protein (274aa)
Ribosome-binding ATPase YchF n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCM0_9GAMM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="
GTP-binding protein YchF; K06942
04302015_12_scaffold_7277_6
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4244..4618)
DNA (375bp) protein (125aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AKH38020.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AKH38020.1};; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadacea
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
peptidyl-tRNA hydrolase n=1 Tax=beta proteobacterium L13 RepID=UPI00036040E3
04302015_12_scaffold_7277_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4608..4772)
DNA (165bp) protein (55aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=159087 species="Bacteria; Proteobacteria;
Peptidyl-tRNA hydrolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=PTH_DECAR
04302015_12_scaffold_7277_8
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4945..5529)
DNA (585bp) protein (195aa)
50S ribosomal protein L25 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCL8_9GAMM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=28885 spe
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
04302015_12_scaffold_7277_9
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5641..6483)
DNA (843bp) protein (281aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9U2_THICA rbh
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