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04302015_12_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_160_1
unknown

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

04302015_12_scaffold_160_2
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

231..1079
DNA (849bp) protein (283aa)
endo-1,4-beta-xylanase B (EC:3.2.1.8); K01181 endo-1,4-beta-xylanase [EC:3.2.1.8] rbh
endo-1,4-beta-xylanase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746026 rbh
Uncharacterized protein {ECO:0000313|EMBL:ELP35512.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
04302015_12_scaffold_160_3

Not on your lists

1098..1904
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L668_HALH1
Marine sediment metagenome DNA, contig: S01H1_S06355 {ECO:0000313|EMBL:GAG13783.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
04302015_12_scaffold_160_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1919..3259)
DNA (1341bp) protein (447aa)
Sulfatase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWC8_PIRSD
sulfatase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
04302015_12_scaffold_160_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(3303..6098)
DNA (2796bp) protein (932aa)
glnD; UTP:GlnB (protein PII) uridylyltransferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] rbh
protein-P-II uridylyltransferase, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174444A rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00049024}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
04302015_12_scaffold_160_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6109..6642)
DNA (534bp) protein (178aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174444B
04302015_12_scaffold_160_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6976..7179)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHD1_DESAA
Uncharacterized protein {ECO:0000313|EMBL:ETX04613.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
04302015_12_scaffold_160_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7282..8061
DNA (780bp) protein (260aa)
cytochrome c assembly protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174444C
Cytochrome c assembly protein {ECO:0000313|EMBL:EDY18178.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
cytochrome c assembly protein
04302015_12_scaffold_160_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8054..9118
DNA (1065bp) protein (355aa)
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] rbh
Shikimate/quinate 5-dehydrogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174444D rbh
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
04302015_12_scaffold_160_10
unknown

Not on your lists

9172..9555
DNA (384bp) protein (128aa)

This feature has no annotations

04302015_12_scaffold_160_11
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9533..10084
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037FA716
Uncharacterized protein {ECO:0000313|EMBL:CCM64371.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
04302015_12_scaffold_160_12
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10134..11075
DNA (942bp) protein (314aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akke
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Hydroxymethylbilane synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174444E rbh
04302015_12_scaffold_160_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11512..12978)
DNA (1467bp) protein (489aa)
monooxygenase, FAD-binding protein (EC:1.14.-.-)
Monooxygenase, FAD-binding protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGH7_COLFT
Oxidoreductase {ECO:0000313|EMBL:AKF02868.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amy
04302015_12_scaffold_160_14
unknown

Not on your lists

13263..14213
DNA (951bp) protein (317aa)

This feature has no annotations

04302015_12_scaffold_160_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14661..16562
DNA (1902bp) protein (634aa)
peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Schlesneria paludicola RepID=UPI00029B50C8 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC83658.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
04302015_12_scaffold_160_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16590..18203
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AE800 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC83659.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
04302015_12_scaffold_160_17
unknown

Not on your lists

18438..20558
DNA (2121bp) protein (707aa)
hypothetical protein
04302015_12_scaffold_160_18
R_Chlamydiae_49_11, Chlamydiae, Bacteria

Not on your lists

20705..22366
DNA (1662bp) protein (554aa)
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_11_curated
04302015_12_scaffold_160_19
unknown

Not on your lists

22895..23185
DNA (291bp) protein (97aa)

This feature has no annotations

04302015_12_scaffold_160_20
unknown

Not on your lists

23338..24285
DNA (948bp) protein (316aa)

This feature has no annotations

04302015_12_scaffold_160_21
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24657..24863)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L9M2_BURGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA59785.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladi
04302015_12_scaffold_160_22
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(25061..26554)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY20240.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
04302015_12_scaffold_160_23
unknown

Not on your lists

26578..26814
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B18
04302015_12_scaffold_160_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26790..27230)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
04302015_12_scaffold_160_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(27227..27778)
DNA (552bp) protein (184aa)
helicase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746BD1
ATP-dependent RNA helicase, DEAD/DEAH box family {ECO:0000313|EMBL:EDY19922.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
DEAD/DEAH box helicase
04302015_12_scaffold_160_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27801..28031)
DNA (231bp) protein (77aa)
translation initiation factor IF-1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746BD3
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
translation initiation factor IF-1; K02518 translation initiation factor IF-1
04302015_12_scaffold_160_27
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28335..29171)
DNA (837bp) protein (279aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J8H5_9BACT
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:CDB54959.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environment
04302015_12_scaffold_160_28
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


29320..29679
DNA (360bp) protein (120aa)
50S ribosomal protein L19 n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174533B
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akk
04302015_12_scaffold_160_29
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29813..30823)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IAK4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK45089.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.
04302015_12_scaffold_160_30
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(30918..32087)
DNA (1170bp) protein (390aa)
Putative two-component hybrid sensor and regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZF5_CALAS
putative two-component hybrid sensor and regulator
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAL98392.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldili
Displaying items 1-30 of 34 in total

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