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04302015_12_scaffold_162

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_162_1
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2082)
DNA (2082bp) protein (694aa)
cytochrome C-containing protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036854F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EON78351.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
04302015_12_scaffold_162_2
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2086..3102)
DNA (1017bp) protein (339aa)
phosphodiesterase; K01113 alkaline phosphatase D [EC:3.1.3.1]
Phosphodiesterase/alkaline phosphatase D n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RRL0_9PLAN
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:EMI21831.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="
04302015_12_scaffold_162_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3150..4394)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SH32_PLABD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY59517.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="
04302015_12_scaffold_162_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4615..6021)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A59 rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY20564.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
04302015_12_scaffold_162_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6026..9076)
DNA (3051bp) protein (1017aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYM4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY20565.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
04302015_12_scaffold_162_6
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

9208..10395
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI0003683C2D
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
04302015_12_scaffold_162_7
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10400..11062)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E49
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
04302015_12_scaffold_162_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(11202..12896)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7F2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY17569.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
04302015_12_scaffold_162_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(12970..13614)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EE487
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:EDY17008.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chtho
hypothetical protein
04302015_12_scaffold_162_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13614..15425)
DNA (1812bp) protein (604aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9A4_9BACT rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EDY17007.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glucose-methanol-choline oxidoreductase
04302015_12_scaffold_162_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15452..16783)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8K5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY17227.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
04302015_12_scaffold_162_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16792..19752)
DNA (2961bp) protein (987aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8K4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY17226.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
04302015_12_scaffold_162_13
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19749..21149)
DNA (1401bp) protein (467aa)
sulfatase n=1 Tax=Zavarzinella formosa RepID=UPI0002D2E1D6
Secreted protein containing DUF1501 {ECO:0000313|EMBL:ELP31353.1}; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodop
sulfatase
04302015_12_scaffold_162_14
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21146..23587)
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1E4_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB14929.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pire
04302015_12_scaffold_162_15
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23587..24234)
DNA (648bp) protein (216aa)
Transcriptional regulator, GntR family n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYJ2_PIRSD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB18151.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.
04302015_12_scaffold_162_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24277..25623)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJK9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29030.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
04302015_12_scaffold_162_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(25628..28444)
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D250_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY19290.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein rbh
04302015_12_scaffold_162_18
unknown

Not on your lists

comp(28441..28809)
DNA (369bp) protein (123aa)

This feature has no annotations

04302015_12_scaffold_162_19
unknown

Not on your lists

comp(28806..29084)
DNA (279bp) protein (93aa)

This feature has no annotations

04302015_12_scaffold_162_20
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(29081..29668)
DNA (588bp) protein (196aa)
RNA polymerase subunit sigma-24 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744743
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
04302015_12_scaffold_162_21
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29787..31466)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174692E rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS55669.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
G-D-S-L family lipolytic protein rbh
04302015_12_scaffold_162_22
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31502..32551)
DNA (1050bp) protein (350aa)
NHL repeat containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3T7_CYCMS rbh
NHL repeat containing protein
NHL repeat containing protein {ECO:0000313|EMBL:AEL25911.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cy
04302015_12_scaffold_162_23
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32582..33205)
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017445FF
Strain MEJ086 contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98776.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
hypothetical protein
04302015_12_scaffold_162_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(33209..33793)
DNA (585bp) protein (195aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D597_9BACT
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein; K05595 multiple antibiotic resistance protein
04302015_12_scaffold_162_25
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(33841..35031)
DNA (1191bp) protein (397aa)
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] rbh
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017445FD rbh
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
04302015_12_scaffold_162_26
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(35173..36156)
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T2S5_9PLAN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EMI43400.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rho
transcriptional regulator
04302015_12_scaffold_162_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(36201..37235)
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=497964 species="Bact
L-threonine 3-dehydrogenase; K00060 threonine 3-dehydrogenase [EC:1.1.1.103] rbh
L-threonine 3-dehydrogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017445FB rbh
04302015_12_scaffold_162_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

37366..37779
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC00_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16047.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
04302015_12_scaffold_162_29
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

37776..38771
DNA (996bp) protein (332aa)
exo-1,4-beta-glucosidase (EC:3.2.1.74); K01188 beta-glucosidase [EC:3.2.1.21]
Lipolytic protein G-D-S-L family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D940_9BACT rbh
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EDY17085.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
04302015_12_scaffold_162_30
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(38839..39690)
DNA (852bp) protein (284aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCM6_9BACT rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EDY15814.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
xylose isomerase domain-containing protein
Displaying items 1-30 of 45 in total

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