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04302015_12_scaffold_430

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_430_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

128..1477
DNA (1350bp) protein (450aa)
NADH-dependent dehydrogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746446 rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:EDY17118.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
oxidoreductase domain-containing protein rbh
04302015_12_scaffold_430_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1545..2819)
DNA (1275bp) protein (425aa)
putative Secretion protein HlyD precursor n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174474D rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB75487.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (stra
04302015_12_scaffold_430_3
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2958..3761
DNA (804bp) protein (268aa)
hydrolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746B0E rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB37315.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain
04302015_12_scaffold_430_4
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4074..4631)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746084
Conserved domain protein {ECO:0000313|EMBL:EDY80840.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
FeS assembly SUF system protein SufT
04302015_12_scaffold_430_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4656..5138)
DNA (483bp) protein (161aa)
FeS assembly protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746083
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:EDY22135.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins
04302015_12_scaffold_430_6

Not on your lists

comp(5147..5710)
DNA (564bp) protein (188aa)
molybdopterin-synthase sulfurylase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746082
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative rhodanese-like domain-containing protein
04302015_12_scaffold_430_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5897..6769
DNA (873bp) protein (291aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase {ECO:0000313|EMBL:EDY22138.1}; EC=2.7.8.8 {ECO:0000313|EMBL:EDY22138.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniob
CDP-diacylglycerol/serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746081 rbh
04302015_12_scaffold_430_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

6824..8047
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746080 rbh
hypothetical protein
Tax=GWC2_Nitrospirae_57_13_curated
04302015_12_scaffold_430_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8130..11132
DNA (3003bp) protein (1001aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI0003482DE8 rbh
two-component hybrid sensor and regulator
Tax=GWF2_Verrucomicrobia_62_7_curated
04302015_12_scaffold_430_10
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11659..15027)
DNA (3369bp) protein (1123aa)
hypothetical protein n=1 Tax=Oscillatoria formosa RepID=UPI00034838FB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBN59206.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
hypothetical protein
04302015_12_scaffold_430_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15161..16027)
DNA (867bp) protein (289aa)
xylanase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DCA rbh
Xylanase {ECO:0000313|EMBL:EDY21801.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
esterase/lipase
04302015_12_scaffold_430_12
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(16050..17339)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744896 rbh
hypothetical protein rbh
Tax=GWF2_Verrucomicrobia_62_7_curated
04302015_12_scaffold_430_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17373..23333)
DNA (5961bp) protein (1987aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446CD rbh
Alpha-2-macroglobulin domain protein {ECO:0000313|EMBL:EDY21935.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
alpha-2-macroglobulin; K06894 rbh
04302015_12_scaffold_430_14
unknown

Not on your lists

23565..24002
DNA (438bp) protein (146aa)

This feature has no annotations

04302015_12_scaffold_430_15
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24046..25191)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746326 rbh
04302015_12_scaffold_430_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25211..26152)
DNA (942bp) protein (314aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
phosphatidate cytidylyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746325 rbh
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:EEF57382.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" s
04302015_12_scaffold_430_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(26301..27290)
DNA (990bp) protein (330aa)
predicted phosphotransferase related to Ser/Thr protein kinases n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466C9 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EDY19352.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphotransferase related to Ser/Thr protein kinases; K07102
04302015_12_scaffold_430_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(27353..28147)
DNA (795bp) protein (265aa)
sugar-phosphate nucleotidyltransferase (EC:2.7.7.-); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
sugar-phosphate nucleotidyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466C8
Nucleotidyl transferase {ECO:0000313|EMBL:EDY19353.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
04302015_12_scaffold_430_19
unknown

Not on your lists

comp(28155..29105)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI0003655743
04302015_12_scaffold_430_20
unknown

Not on your lists

29123..29386
DNA (264bp) protein (88aa)

This feature has no annotations

04302015_12_scaffold_430_21
unknown

Not on your lists

29415..29507
DNA (93bp) protein (31aa)

This feature has no annotations

04302015_12_scaffold_430_22
unknown

Not on your lists

29591..29761
DNA (171bp) protein (57aa)

This feature has no annotations

04302015_12_scaffold_430_23
Macrococcus caseolyticus, Macrococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29923..30360
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=B9EAX9_MACCJ
hypothetical protein; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Uncharacterized protein {ECO:0000313|EMBL:BAH17390.1}; TaxID=458233 species="Bacteria; Firmicutes; Bacilli; Bacillales; Macrococcus.;" source="Macrococcus caseolyticus (strain JCSC5402).;"
04302015_12_scaffold_430_24
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

30423..31757
DNA (1335bp) protein (445aa)
signal peptide protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AB26A
Uncharacterized protein {ECO:0000313|EMBL:EDL57604.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
04302015_12_scaffold_430_25
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31805..32182
DNA (378bp) protein (126aa)
Hypothetical exported 24-amino acid repeat protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174489A
MORN repeat-containing protein
Tax=GWF2_Bacteroidetes_33_38_curated
04302015_12_scaffold_430_26
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

32221..32931
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037A5AFF
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ABM80126.1}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus but
04302015_12_scaffold_430_27
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

32928..33638
DNA (711bp) protein (237aa)
short chain dehydrogenase/reductase family oxidoreductase (EC:1.1.1.100)
putative oxidoreductase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B41 rbh
Tax=RBG_16_Spirochaete_67_19_curated
04302015_12_scaffold_430_28
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33707..34507
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D244_9BACT
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
04302015_12_scaffold_430_29
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

34533..35837
DNA (1305bp) protein (435aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI00037B3860 rbh
Peptidase M20 {ECO:0000313|EMBL:KIF28154.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
04302015_12_scaffold_430_30
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

35872..37800
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030B0A5A rbh
beta-lactamase domain-containing protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Displaying items 1-30 of 35 in total

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