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04302015_12_scaffold_456

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_456_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=497964 species="Bacteria; Verrucom
biotin synthetase; K01012 biotin synthetase [EC:2.8.1.6]
biotin synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744A1D
04302015_12_scaffold_456_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

367..1641
DNA (1275bp) protein (425aa)
Oxidoreductase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D945_9BACT rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:EDY17090.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin42
oxidoreductase domain-containing protein rbh
04302015_12_scaffold_456_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1722..3470)
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY18085.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
04302015_12_scaffold_456_4
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3570..4121)
DNA (552bp) protein (184aa)
hypothetical protein AcelC_02826 id=4207883 bin=GWF2_Lentisphaerae_52_8 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
04302015_12_scaffold_456_5

Not on your lists

comp(4118..5452)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1QBB9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGF93293.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
04302015_12_scaffold_456_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5544..6569)
DNA (1026bp) protein (342aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EDY19599.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EDY19599.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="
Protein-tyrosine kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017450F1
04302015_12_scaffold_456_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6768..7436)
DNA (669bp) protein (223aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
peptide methionine sulfoxide reductase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745961
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
04302015_12_scaffold_456_8
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7557..7985
DNA (429bp) protein (143aa)
hemin transporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174595F
glbO; 2-on-2 hemoglobin; K06886 hemoglobin
2-on-2 hemoglobin {ECO:0000313|EMBL:BAM02440.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (str
04302015_12_scaffold_456_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8028..8447
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174569F
Uncharacterized protein {ECO:0000313|EMBL:EEF59629.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
04302015_12_scaffold_456_10
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8454..9392
DNA (939bp) protein (313aa)
glycerate dehydrogenase (gyaR-like) (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017469AA
D-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EIJ46210.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspir
04302015_12_scaffold_456_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9462..10052
DNA (591bp) protein (197aa)
Putative uncharacterized protein id=2504069 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
04302015_12_scaffold_456_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10068..12038)
DNA (1971bp) protein (657aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipopolysaccharide heptosyltransferase II n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446EA rbh
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EDY18797.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
04302015_12_scaffold_456_13
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12119..13447
DNA (1329bp) protein (443aa)
Sulfatase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3U0_9BACT
twin-arginine translocation pathway signal
Tax=RBG_16_Planctomycetes_64_10_curated
04302015_12_scaffold_456_14
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13523..14161)
DNA (639bp) protein (213aa)
Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGA6_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY83134.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG
LuxR family transcriptional regulator
04302015_12_scaffold_456_15
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

14340..14789
DNA (450bp) protein (150aa)
biopolymer transporter ExbD n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017463D8
Biopolymer transporter ExbD {ECO:0000313|EMBL:AKC84132.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
04302015_12_scaffold_456_16
uncultured verrucomicrobium HF0500_16O23, Verrucomicrobia, Bacteria

Not on your lists

14832..17561
DNA (2730bp) protein (910aa)
Glucose/sorbosone dehydrogenases n=1 Tax=uncultured verrucomicrobium HF0500_16O23 RepID=E7C570_9BACT rbh
Glucose/sorbosone dehydrogenases {ECO:0000313|EMBL:ADI22594.1}; TaxID=723598 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured verrucomicrobium HF0500_16O23.;"
heme-binding protein
04302015_12_scaffold_456_17

Not on your lists

17602..18012
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9S0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGW45559.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
04302015_12_scaffold_456_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18213..18701
DNA (489bp) protein (163aa)
major anaerobically induced transmembrane protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B5D
Cytochrome c class I {ECO:0000313|EMBL:EEF61925.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosph
membrane-bound dehydrogenase domain-containing protein
04302015_12_scaffold_456_19
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

18706..19431
DNA (726bp) protein (242aa)
Probable cytochrome c oxidase biogenesis protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B60
hypothetical protein
Tax=GWA2_OP3_52_8_curated
04302015_12_scaffold_456_20
unknown

Not on your lists

19454..19771
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B61
04302015_12_scaffold_456_21

Not on your lists

19811..20227
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9S0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGW45559.1}; TaxID=1403002 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac161.;"
04302015_12_scaffold_456_22
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20335..21810
DNA (1476bp) protein (492aa)
TonB-dependent receptor protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746367
TonB-dependent receptor protein
TonB-dependent receptor protein {ECO:0000313|EMBL:CAD85442.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosom
04302015_12_scaffold_456_23
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

21807..22439
DNA (633bp) protein (211aa)
Outer membrane receptor protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B329_9BACT
Outer membrane receptor protein {ECO:0000313|EMBL:EIQ01671.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TA
TonB-dependent receptor-like protein; K02014 iron complex outermembrane recepter protein
04302015_12_scaffold_456_24
unknown

Not on your lists

22683..23387
DNA (705bp) protein (235aa)

This feature has no annotations

04302015_12_scaffold_456_25
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

23420..24427
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D6D8_SINAD
hypothetical protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
04302015_12_scaffold_456_26
unknown

Not on your lists

24497..24772
DNA (276bp) protein (92aa)

This feature has no annotations

04302015_12_scaffold_456_27
unknown

Not on your lists

24769..25089
DNA (321bp) protein (107aa)

This feature has no annotations

04302015_12_scaffold_456_28
unknown

Not on your lists

comp(25288..25911)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000377343E
04302015_12_scaffold_456_29
unknown

Not on your lists

comp(26022..26270)
DNA (249bp) protein (83aa)

This feature has no annotations

04302015_12_scaffold_456_30
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26407..26781)
DNA (375bp) protein (125aa)
Uncharacterized protein id=4443887 bin=GWA2_Deltaproteo_65_63 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Displaying items 1-30 of 44 in total

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