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04302015_13_scaffold_54

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_54_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93..1880)
DNA (1788bp) protein (596aa)
succinate dehydrogenase or fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromati
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX51_HALNC rbh
04302015_13_scaffold_54_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1877..2227)
DNA (351bp) protein (117aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX52_HALNC rbh
succinate dehydrogenase, hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:ACX97172.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halo
04302015_13_scaffold_54_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2221..2595)
DNA (375bp) protein (125aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX53_HALNC rbh
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ACX97173.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus
04302015_13_scaffold_54_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2695..3441)
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX54_HALNC rbh
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACX97174.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source
04302015_13_scaffold_54_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3545..4099)
DNA (555bp) protein (185aa)
Transcriptional regulator, XRE family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX55_HALNC rbh
XRE family transcriptional regulator rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACX97175.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source=
04302015_13_scaffold_54_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4265..5713
DNA (1449bp) protein (483aa)
class III aminotransferase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18] rbh
Aminotransferase class-III n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX56_HALNC rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACX97176.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
04302015_13_scaffold_54_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5710..7224
DNA (1515bp) protein (505aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] rbh
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX57_HALNC rbh
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ACX97177.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" sou
04302015_13_scaffold_54_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7396..7917
DNA (522bp) protein (174aa)
Membrane protein-like protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX58_HALNC rbh
membrane protein-like protein rbh
Membrane protein-like protein {ECO:0000313|EMBL:ACX97178.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothi
04302015_13_scaffold_54_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7983..9341)
DNA (1359bp) protein (453aa)
glutamine synthetase II; K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase, type III n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX59_HALNC rbh
Glutamine synthetase, type III {ECO:0000313|EMBL:ACX97179.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Haloth
04302015_13_scaffold_54_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9344..10666)
DNA (1323bp) protein (441aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] rbh
4-aminobutyrate aminotransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX60_HALNC rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACX97180.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halo
04302015_13_scaffold_54_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10690..12177)
DNA (1488bp) protein (496aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-] rbh
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACX97181.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACX97181.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobaci
Betaine-aldehyde dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX61_HALNC rbh
04302015_13_scaffold_54_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12267..13727)
DNA (1461bp) protein (487aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.24); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:ACX97182.1}; EC=1.2.1.24 {ECO:0000313|EMBL:ACX97182.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Haloth
Succinic semialdehyde dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX62_HALNC rbh
04302015_13_scaffold_54_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13885..14718)
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ5_HALNC rbh
binding-protein-dependent transporters inner membrane component; K11074 putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACX97183.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillace
04302015_13_scaffold_54_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14715..15629)
DNA (915bp) protein (305aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ6_HALNC rbh
binding-protein-dependent transporters inner membrane component; K11075 putrescine transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACX97184.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillace
04302015_13_scaffold_54_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15644..16756)
DNA (1113bp) protein (371aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothio
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ7_HALNC rbh
spermidine/putrescine ABC transporter ATPase; K11076 putrescine transport system ATP-binding protein rbh
04302015_13_scaffold_54_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16877..17995)
DNA (1119bp) protein (373aa)
Putrescine-binding periplasmic protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXJ8_HALNC rbh
family 1 extracellular solute-binding protein; K11073 putrescine transport system substrate-binding protein rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" sour
04302015_13_scaffold_54_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18140..19555)
DNA (1416bp) protein (472aa)
class III aminotransferase; K12256 putrescine aminotransferase [EC:2.6.1.-] rbh
Aminotransferase class-III n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK0_HALNC rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACX97188.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
04302015_13_scaffold_54_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19596..20966)
DNA (1371bp) protein (457aa)
glutamate--putrescine ligase (EC:6.3.1.11); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamate--putrescine ligase {ECO:0000313|EMBL:ACX97189.1}; EC=6.3.1.11 {ECO:0000313|EMBL:ACX97189.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacil
Glutamate--putrescine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK1_HALNC rbh
04302015_13_scaffold_54_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21001..21759)
DNA (759bp) protein (253aa)
gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94); K07010 putative glutamine amidotransferase rbh
Gamma-glutamyl-gamma-aminobutyrate hydrolase {ECO:0000313|EMBL:ACX97190.1}; EC=3.5.1.94 {ECO:0000313|EMBL:ACX97190.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiale
Gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK2_HALNC rbh
04302015_13_scaffold_54_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22008..23519
DNA (1512bp) protein (504aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK3_HALNC rbh
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ACX97191.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillacea
04302015_13_scaffold_54_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23551..24858)
DNA (1308bp) protein (436aa)
FAD dependent oxidoreductase; K09471 gamma-glutamylputrescine oxidase [EC:1.4.3.-] rbh
FAD dependent oxidoreductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK4_HALNC rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACX97192.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothio
04302015_13_scaffold_54_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24871..25821)
DNA (951bp) protein (317aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] rbh
Agmatinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK5_HALNC rbh
Agmatinase {ECO:0000313|EMBL:ACX97193.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolita
04302015_13_scaffold_54_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26199..27587
DNA (1389bp) protein (463aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Aminotransferase class-III n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK6_HALNC rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACX97194.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothioba
04302015_13_scaffold_54_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27643..28821)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK7_HALNC rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACX97195.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="H
04302015_13_scaffold_54_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28987..29361)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK8_HALNC rbh
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACX97196.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacill
04302015_13_scaffold_54_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29358..30461)
DNA (1104bp) protein (368aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] rbh
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=555778 species="Bacteria; Proteob
Alanine racemase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK9_HALNC rbh
04302015_13_scaffold_54_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30481..31800)
DNA (1320bp) protein (440aa)
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothi
D-amino acid dehydrogenase small subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL0_HALNC rbh
04302015_13_scaffold_54_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31966..32469
DNA (504bp) protein (168aa)
Transcriptional regulator, AsnC family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL1_HALNC rbh
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein rbh
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACX97199.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source
Displaying 28 items

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