ggKbase home page

04302015_13_scaffold_82

Search features with annotation key words

Displaying items 1-30 of 86 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_82_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1365)
DNA (1365bp) protein (455aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=75379 species="Bact
DNA topoisomerase 4 subunit A n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X546_THIK1
04302015_13_scaffold_82_2
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1367..3325)
DNA (1959bp) protein (653aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=426114 species="Bac
parE; DNA topoisomerase 4 subunit B (Topoisomerase IV subunit B) (EC:5.99.1.-)
DNA topoisomerase 4 subunit B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRP6_THIA3 rbh
04302015_13_scaffold_82_3
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4082)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X548_THIK1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG29872.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia
04302015_13_scaffold_82_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4241..5086)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X549_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92447.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
04302015_13_scaffold_82_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..7708
DNA (2259bp) protein (753aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X550_THIK1 rbh
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADG29874.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (st
PAS/PAC sensor-containing diguanylate cyclase
04302015_13_scaffold_82_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7735..8550)
DNA (816bp) protein (272aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X551_THIK1 rbh
04302015_13_scaffold_82_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8615..8998
DNA (384bp) protein (128aa)
UPF0102 protein Tint_0470 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X552_THIK1 rbh
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Tint_0470 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
04302015_13_scaffold_82_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9078..9677
DNA (600bp) protein (200aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isom
Phosphoheptose isomerase n=2 Tax=Thiomonas RepID=D5X553_THIK1 rbh
diaA; DnaA initiator-associating protein diaA
04302015_13_scaffold_82_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9674..10393
DNA (720bp) protein (240aa)
Transport-associated protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X554_THIK1 rbh
transport-associated protein
Transport-associated protein {ECO:0000313|EMBL:ADG29878.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (
04302015_13_scaffold_82_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10430..10960
DNA (531bp) protein (177aa)
ppa; Inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase) (EC:3.6.1.1) rbh
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=554131 species="Bac
Inorganic pyrophosphatase n=2 Tax=Thiomonas RepID=D5X555_THIK1 rbh
04302015_13_scaffold_82_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11032..11937)
DNA (906bp) protein (302aa)
putative 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) rbh
Putative 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CAZ87296.1}; EC=1.1.1.31 {ECO:0000313|EMBL:CAZ87296.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Putative 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ5_THIA3 rbh
04302015_13_scaffold_82_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11966..13246)
DNA (1281bp) protein (427aa)
Putative Na+/H+ antiporter NhaD and related arsenite permease n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ6_THIA3 rbh
Putative Na+/H+ antiporter NhaD and related arsenite permease {ECO:0000313|EMBL:CDW92439.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="T
putative Na+/H+ antiporter NhaD and related arsenite permease rbh
04302015_13_scaffold_82_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13358..17317
DNA (3960bp) protein (1320aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ7_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ87298.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
conserved hypothetical protein; putative exported protein rbh
04302015_13_scaffold_82_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17305..18348)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X559_THIK1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG29883.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiob
04302015_13_scaffold_82_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18503..19243
DNA (741bp) protein (247aa)
4-nitrobenzoate reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRQ9_THIA3 rbh
pnbA; 4-nitrobenzoate reductase rbh
4-nitrobenzoate reductase {ECO:0000313|EMBL:CAZ87300.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM
04302015_13_scaffold_82_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19240..19509
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRR0_THIA3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87301.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
04302015_13_scaffold_82_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19506..20723
DNA (1218bp) protein (406aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11) rbh
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570,
Nicotinate phosphoribosyltransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRR1_THIA3 rbh
04302015_13_scaffold_82_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20757..21992)
DNA (1236bp) protein (412aa)
Amino acid permease-associated region n=1 Tax=mine drainage metagenome RepID=E6PUH1_9ZZZZ
Amino acid permease-associated region {ECO:0000313|EMBL:CDW92433.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
amino acid permease-associated protein
04302015_13_scaffold_82_19
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22007..22162)
DNA (156bp) protein (52aa)
Amino acid permease-associated region n=1 Tax=mine drainage metagenome RepID=E6PUH1_9ZZZZ
Amino acid permease-associated region {ECO:0000313|EMBL:CDW92433.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative amino acid transporter
04302015_13_scaffold_82_20
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22307..22966
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X563_THIK1 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW92432.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein; K00782 hypothetical protein rbh
04302015_13_scaffold_82_21
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22956..24374
DNA (1419bp) protein (473aa)
Transmembrane protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X564_THIK1 rbh
Transmembrane protein {ECO:0000313|EMBL:CDW92431.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
transmembrane protein rbh
04302015_13_scaffold_82_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24371..25357
DNA (987bp) protein (329aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K00090 gluconate 2-dehydrogenase [EC:1.1.1.215] rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X565_THIK1 rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADG29889.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source
04302015_13_scaffold_82_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25364..26893
DNA (1530bp) protein (510aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X566_THIK1 rbh
hypothetical protein; K09760 DNA recombination protein RmuC rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG29890.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia
04302015_13_scaffold_82_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26961..29324
DNA (2364bp) protein (788aa)
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CDW92428.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CDW92428.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thi
Putative Ribonucleoside-diphosphate reductase large chain (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRR7_THIA3 rbh
04302015_13_scaffold_82_25
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29376..29633)
DNA (258bp) protein (86aa)
Cell division topological specificity factor n=2 Tax=Thiomonas RepID=D5X568_THIK1 rbh
minE; Cell division topological specificity factor
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiom
04302015_13_scaffold_82_26
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29648..30460)
DNA (813bp) protein (271aa)
Site-determining protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X569_THIK1 rbh
septum site-determining protein MinD; K03609 septum site-determining protein MinD rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Th
04302015_13_scaffold_82_27
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30480..31298)
DNA (819bp) protein (273aa)
Probable septum site-determining protein MinC n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X570_THIK1 rbh
septum site-determining protein MinC; K03610 septum site-determining protein MinC rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas inte
04302015_13_scaffold_82_28
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31393..32076)
DNA (684bp) protein (228aa)
lolD1; Lipoprotein-releasing system ATP-binding protein lolD (EC:3.6.3.-) rbh
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000313|EMBL:CAZ87312.1};; TaxID=426114 species="Bacteria; Pro
Lipoprotein-releasing system ATP-binding protein lolD n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRS1_THIA3 rbh
04302015_13_scaffold_82_29
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32135..33001)
DNA (867bp) protein (289aa)
UspA domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X572_THIK1 rbh
UspA domain protein {ECO:0000313|EMBL:CDW92421.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
UspA domain-containing protein rbh
04302015_13_scaffold_82_30
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33012..34490)
DNA (1479bp) protein (493aa)
Sulfate transporter n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRS3_THIA3 rbh
sulfate transporter rbh
Sulphate transporter {ECO:0000313|EMBL:ADG29897.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobaci
Displaying items 1-30 of 86 in total

View Taxonomy