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04302015_13_scaffold_108

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Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_108_1
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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133..423
DNA (291bp) protein (97aa)
Alpha/beta hydrolase fold protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1H5_THIK1
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADG30971.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K
04302015_13_scaffold_108_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(451..1275)
DNA (825bp) protein (275aa)
Transcriptional regulator, IclR family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1H6_THIK1 rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADG30972.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (str
04302015_13_scaffold_108_3
unknown

Not on your lists

1623..1862
DNA (240bp) protein (80aa)

This feature has no annotations

04302015_13_scaffold_108_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1876..3060
DNA (1185bp) protein (395aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1H7_THIK1 rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADG30973.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (stra
04302015_13_scaffold_108_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3072..4196
DNA (1125bp) protein (375aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1H8_THIK1 rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADG30974.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (stra
04302015_13_scaffold_108_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4216..5334
DNA (1119bp) protein (373aa)
alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1H9_THIK1 rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADG30975.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas inte
04302015_13_scaffold_108_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5373..6257
DNA (885bp) protein (295aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I0_THIK1 rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG30976.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (st
04302015_13_scaffold_108_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6254..7246
DNA (993bp) protein (331aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I1_THIK1 rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADG30977.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas inte
04302015_13_scaffold_108_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7875..8240
DNA (366bp) protein (122aa)
Mercuric transport protein MerT n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I3_THIK1 rbh
mercuric transport protein MerT; K08363 mercuric ion transport protein
Mercuric transport protein MerT {ECO:0000313|EMBL:ADG30979.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12
04302015_13_scaffold_108_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8257..8535
DNA (279bp) protein (93aa)
Mercuric transport protein periplasmic component n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I4_THIK1 rbh
mercuric transport periplasmic protein; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_13_scaffold_108_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8629..10299
DNA (1671bp) protein (557aa)
merA1; Mercuric reductase (Hg(II) reductase) (EC:1.16.1.1) rbh
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223, ECO:0000313|EMBL:CAZ88468.1};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=426114 species="B
Mercuric reductase (Hg(II) reductase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT49_THIA3 rbh
04302015_13_scaffold_108_12
unknown

Not on your lists

comp(10353..10463)
DNA (111bp) protein (37aa)

This feature has no annotations

04302015_13_scaffold_108_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11074..13656
DNA (2583bp) protein (861aa)
DNA mismatch repair protein MutS n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT48_THIA3 rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" sou
mutS; DNA mismatch repair protein rbh
04302015_13_scaffold_108_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13663..14451)
DNA (789bp) protein (263aa)
GTP cyclohydrolase I (EC:3.5.4.16); K09007 hypothetical protein
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomon
GTP cyclohydrolase FolE2 n=2 Tax=Thiomonas RepID=D6CT47_THIA3 rbh
04302015_13_scaffold_108_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14699..15499)
DNA (801bp) protein (267aa)
ABC-3 protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I8_THIK1 rbh
ABC-3 protein; K09816 zinc transport system permease protein rbh
ABC-3 protein {ECO:0000313|EMBL:ADG30984.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus in
04302015_13_scaffold_108_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..16220)
DNA (729bp) protein (243aa)
ABC transporter; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] rbh
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1I9_THIK1 rbh
04302015_13_scaffold_108_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16328..17311
DNA (984bp) protein (328aa)
Periplasmic solute binding protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J0_THIK1 rbh
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ADG30986.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas
04302015_13_scaffold_108_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17316..19229)
DNA (1914bp) protein (638aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (EC:2.2.1.7) rbh
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT42_THIA3 rbh
04302015_13_scaffold_108_19
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19270..19770)
DNA (501bp) protein (167aa)
Putative Disulfide bond formation protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT41_THIA3 rbh
putative Disulfide bond formation protein
Putative Disulfide bond formation protein {ECO:0000313|EMBL:CAZ88460.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxyd
04302015_13_scaffold_108_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19816..20790)
DNA (975bp) protein (325aa)
ispA; Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) (EC:2.5.1.10) rbh
Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) {ECO:0000313|EMBL:CAZ88459.1}; EC=2.5.1.10 {ECO:0000313|EMBL:CAZ88459.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betapr
Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT40_THIA3 rbh
04302015_13_scaffold_108_21
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20783..21049)
DNA (267bp) protein (89aa)
xseB; Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit) (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 small subunit n=2 Tax=Thiomonas RepID=D5X1J4_THIK1 rbh
04302015_13_scaffold_108_22
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21182..22288
DNA (1107bp) protein (369aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J5_THIK1 rbh
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:ADG30991.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia
04302015_13_scaffold_108_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22386..23249
DNA (864bp) protein (288aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Rhodanese domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J6_THIK1 rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacil
04302015_13_scaffold_108_24
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23368..23802
DNA (435bp) protein (145aa)
Universal stress protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT35_THIA3 rbh
putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like
Putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like {ECO:0000313|EMBL:CAZ88454.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thio
04302015_13_scaffold_108_25
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23828..24262
DNA (435bp) protein (145aa)
Putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT34_THIA3 rbh
putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like
Putative universal stress protein UspA/Adenine nucleotide alpha hydrolases-like {ECO:0000313|EMBL:CAZ88453.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thio
04302015_13_scaffold_108_26
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24288..25271)
DNA (984bp) protein (328aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1J9_THIK1 rbh
Putative hydrolase {ECO:0000313|EMBL:CDW95641.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_13_scaffold_108_27
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25348..25920)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT32_THIA3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88451.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
04302015_13_scaffold_108_28
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25929..26999)
DNA (1071bp) protein (357aa)
putative adenosine deaminase (EC:3.5.4.4) rbh
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_0196
Putative adenosine deaminase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT31_THIA3 rbh
04302015_13_scaffold_108_29
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27123..27824
DNA (702bp) protein (234aa)
Pirin domain protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X1K2_THIK1 rbh
Pirin-like protein CC_1473 {ECO:0000313|EMBL:CDW95637.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
Pirin domain-containing protein; K06911 rbh
04302015_13_scaffold_108_30
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27886..28980)
DNA (1095bp) protein (365aa)
Putative ABC-type transport system, periplasmic component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CT29_THIA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDW95636.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative ABC-type transport system, periplasmic component rbh
Displaying items 1-30 of 59 in total

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