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04302015_13_scaffold_17

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_17_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..225)
DNA (225bp) protein (75aa)
Putative lipase / esterase protein n=1 Tax=mine drainage metagenome RepID=E6PNV3_9ZZZZ
Putative lipase / esterase protein {ECO:0000313|EMBL:CDW94614.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative lipase / esterase protein
04302015_13_scaffold_17_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466..1539)
DNA (1074bp) protein (358aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000366FF74 rbh
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
04302015_13_scaffold_17_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1541..2707)
DNA (1167bp) protein (389aa)
putative Phosphoribosylaminoimidazole carboxylase PurK (EC:4.1.1.21)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037137F6 rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
04302015_13_scaffold_17_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2778..3260)
DNA (483bp) protein (161aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WY81_THIK1
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
04302015_13_scaffold_17_5
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3411..4307
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00035D0200 rbh
Thioredoxin {ECO:0000313|EMBL:CDW94603.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative Thioredoxin
04302015_13_scaffold_17_6

Not on your lists

comp(4349..5239)
DNA (891bp) protein (297aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) {ECO:0000313|EMBL:CBH99284.1}; EC=6.3.2.6 {ECO:0000313|EMBL:CBH99284.1};; TaxID=410659 species="unclassified sequences; met
purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) n=1 Tax=mine drainage metagenome RepID=E6PWH7_9ZZZZ rbh
04302015_13_scaffold_17_7

Not on your lists

5747..6727
DNA (981bp) protein (327aa)
Putative sulfurtransferase (EC:2.8.1.2)
Putative sulfurtransferase n=1 Tax=mine drainage metagenome RepID=E6PWH9_9ZZZZ rbh
Putative sulfurtransferase {ECO:0000313|EMBL:CBH99286.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
04302015_13_scaffold_17_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6848..7057)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CR27_THIA3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87068.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
04302015_13_scaffold_17_9

Not on your lists

comp(7066..8193)
DNA (1128bp) protein (376aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
Phospho-2-dehydro-3-deoxyheptonate aldolase,Phe-sensitive (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) n=1 Tax=mine drainage metagenome RepID=E6PWI1_9ZZZZ rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase,Phe-sensitive (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) {ECO:0000313|EMBL:CBH99288
04302015_13_scaffold_17_10

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8591..9412
DNA (822bp) protein (274aa)
Putative Polyphosphate kinase n=1 Tax=mine drainage metagenome RepID=E6PWI3_9ZZZZ rbh
Putative Polyphosphate kinase {ECO:0000313|EMBL:CBH99290.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative Polyphosphate kinase
04302015_13_scaffold_17_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9465..10007)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000381F3F1 rbh
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ADG32033.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus
04302015_13_scaffold_17_12

Not on your lists

comp(10132..11595)
DNA (1464bp) protein (488aa)
Protein tldD n=1 Tax=mine drainage metagenome RepID=E6PWI4_9ZZZZ rbh
Protein tldD {ECO:0000313|EMBL:CBH99291.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tldD; Protein tldD
04302015_13_scaffold_17_13

Not on your lists

comp(11684..12130)
DNA (447bp) protein (149aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=mine drainage metagenome RepID=E6PWI5_9ZZZZ rbh
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:CBH99292.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
moaC; molybdenum cofactor biosynthesis protein C
04302015_13_scaffold_17_14
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12205..13041)
DNA (837bp) protein (279aa)
putative Orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00038065EE rbh
04302015_13_scaffold_17_15

Not on your lists

comp(13052..13963)
DNA (912bp) protein (304aa)
Putative Uracil-DNA glycosylase {ECO:0000313|EMBL:CBH99294.1}; EC=3.2.2.- {ECO:0000313|EMBL:CBH99294.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="m
phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Putative Uracil-DNA glycosylase n=1 Tax=mine drainage metagenome RepID=E6PWI7_9ZZZZ rbh
04302015_13_scaffold_17_16

Not on your lists

comp(13978..14496)
DNA (519bp) protein (173aa)
Putative Ribosomal-protein-alanine acetyltransferase RimI {ECO:0000313|EMBL:CBH99295.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CBH99295.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecologi
Putative Ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Putative Ribosomal-protein-alanine acetyltransferase RimI n=1 Tax=mine drainage metagenome RepID=E6PWI8_9ZZZZ rbh
04302015_13_scaffold_17_17

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comp(14493..15308)
DNA (816bp) protein (272aa)
Putative Peptidase M22, glycoprotease n=1 Tax=mine drainage metagenome RepID=E6PWI9_9ZZZZ rbh
Putative Peptidase M22, glycoprotease {ECO:0000313|EMBL:CBH99296.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative Peptidase M22, glycoprotease
04302015_13_scaffold_17_18

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15519..16976
DNA (1458bp) protein (486aa)
Putative Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CBH99300.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBH99300.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metag
putative Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=mine drainage metagenome RepID=E6PWJ3_9ZZZZ rbh
04302015_13_scaffold_17_19

Not on your lists

17399..18586
DNA (1188bp) protein (396aa)
Putative Glycerol-3-phosphate dehydrogenase (NAD(P)+) 1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1) gpsA1 {ECO:0000313|EMBL:CBH99304.1}; EC=1.1.1.94 {ECO:0000313|EMBL:CBH99304.1};; TaxID=
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Putative Glycerol-3-phosphate dehydrogenase (NAD(P)+) 1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1) gpsA1 n=1 Tax=mine drainage metagenome RepID=E6PWJ7_9ZZZZ
04302015_13_scaffold_17_20

Not on your lists

18596..19366
DNA (771bp) protein (257aa)
Putative HAD-superfamily hydrolase subfamily IIB n=1 Tax=mine drainage metagenome RepID=E6PWJ8_9ZZZZ
Putative HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CBH99305.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
alpha,alpha-trehalose-phosphate synthase rbh
04302015_13_scaffold_17_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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19323..20828
DNA (1506bp) protein (502aa)
glucosyl-glycerol-phosphate synthase (EC:2.4.1.213); K03692 glucosylglycerol-phosphate synthase [EC:2.4.1.213]
Glucosyl-glycerol-phosphate synthase {ECO:0000313|EMBL:AAZ98579.1}; EC=2.4.1.213 {ECO:0000313|EMBL:AAZ98579.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales;
glucosylglycerol-phosphate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE264
04302015_13_scaffold_17_22
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20833..22395
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00035F6F42 rbh
Na+/glucose cotransporter {ECO:0000313|EMBL:KGI77023.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas
dhlC; sodium/glucose cotransporter 2; K03307 solute:Na+ symporter, SSS family
04302015_13_scaffold_17_23

Not on your lists

22409..23539
DNA (1131bp) protein (377aa)
Putative MscS Mechanosensitive ion channel family protein n=1 Tax=mine drainage metagenome RepID=E6PWK0_9ZZZZ
Putative MscS Mechanosensitive ion channel family protein {ECO:0000313|EMBL:CBH99307.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage meta
mechanosensitive ion channel MscS
04302015_13_scaffold_17_24

Not on your lists

23685..24374
DNA (690bp) protein (230aa)
Putative response regulator, CheY family n=1 Tax=mine drainage metagenome RepID=E6PWK3_9ZZZZ rbh
Putative response regulator, CheY family {ECO:0000313|EMBL:CBH99310.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
qseB; Transcriptional regulatory protein qseB
04302015_13_scaffold_17_25

Not on your lists

24422..25963
DNA (1542bp) protein (514aa)
putative two-component sensor kinase (EC:2.7.13.3)
Putative two-component sensor kinase n=1 Tax=mine drainage metagenome RepID=E6PWK4_9ZZZZ rbh
Putative two-component sensor kinase {ECO:0000313|EMBL:CBH99311.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
04302015_13_scaffold_17_26

Not on your lists

comp(25970..28525)
DNA (2556bp) protein (852aa)
Putative DNA topoisomerase III, bacterial-type {ECO:0000313|EMBL:CBH99312.1}; EC=5.99.1.2 {ECO:0000313|EMBL:CBH99312.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metageno
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
Putative DNA topoisomerase III, bacterial-type n=1 Tax=mine drainage metagenome RepID=E6PWK5_9ZZZZ rbh
04302015_13_scaffold_17_27

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comp(28542..29099)
DNA (558bp) protein (186aa)
Putative thioredoxin n=1 Tax=mine drainage metagenome RepID=E6PWK6_9ZZZZ rbh
Putative thioredoxin {ECO:0000313|EMBL:CBH99313.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative thioredoxin
04302015_13_scaffold_17_28

Not on your lists

29287..29775
DNA (489bp) protein (163aa)
Putative Histone-lysine N-methyltransferase {ECO:0000313|EMBL:CBH99314.1}; EC=2.1.1.43 {ECO:0000313|EMBL:CBH99314.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes
Putative Histone-lysine N-methyltransferase (EC:2.1.1.43)
Putative Histone-lysine N-methyltransferase n=1 Tax=mine drainage metagenome RepID=E6PWK7_9ZZZZ rbh
04302015_13_scaffold_17_29
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29781..30611
DNA (831bp) protein (277aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036646AA rbh
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ADG29980.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strai
04302015_13_scaffold_17_30

Not on your lists

30654..31412
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PWK9_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH99316.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Conserved hypothetical protein; putative exported protein
Displaying items 1-30 of 64 in total

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